FFCP PHASE1:Hg19::chr10:30663371..30663382,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55149,729668 | |EntrezGene=55149,729668 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25532 | |HGNC=25532 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000471055,NR_003524,uc001ivb.3,uc001ivd.2_5end | |association_with_transcript=0bp_to_ENST00000471055,NR_003524,uc001ivb.3,uc001ivd.2_5end | ||
|cluster_id=chr10:30663371..30663382,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_5_at_MTPAP_5end | |description=CAGE_peak_5_at_MTPAP_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!2.34e-21!5;CL:0000540!3.19e-07!6;CL:0000031!3.19e-07!6;CL:0000404!3.19e-07!6 | |ontology_enrichment_celltype=CL:0002322!2.34e-21!5;CL:0000540!3.19e-07!6;CL:0000031!3.19e-07!6;CL:0000404!3.19e-07!6 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.27e-30;10!UBERON:0005564;2.27e-30;10!UBERON:0007297;1.07e-17;2 | |ontology_enrichment_development_v019=UBERON:0009117;2.27e-30;10!UBERON:0005564;2.27e-30;10!UBERON:0007297;1.07e-17;2 | ||
|ontology_enrichment_disease=DOID:3095!2.53e-08!22;DOID:2994!2.53e-08!22;DOID:3905!1.41e-07!9 | |ontology_enrichment_disease=DOID:3095!2.53e-08!22;DOID:2994!2.53e-08!22;DOID:3905!1.41e-07!9 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!7.36e-14!11;UBERON:0000473!1.90e-13!8;UBERON:0000991!8.41e-07!21;UBERON:0009196!8.41e-07!21;UBERON:0009117!8.41e-07!21;UBERON:0005564!8.41e-07!21 | |ontology_enrichment_uberon=UBERON:0003135!7.36e-14!11;UBERON:0000473!1.90e-13!8;UBERON:0000991!8.41e-07!21;UBERON:0009196!8.41e-07!21;UBERON:0009117!8.41e-07!21;UBERON:0005564!8.41e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0003135;3.65e-48;11!UBERON:0000473;1.04e-37;8!UBERON:0001301;7.06e-34;1!UBERON:0003101;1.71e-24;22!UBERON:0000079;1.71e-24;22!UBERON:0000991;6.23e-15;21!UBERON:0006947;2.89e-12;3!UBERON:0004054;2.89e-12;3!UBERON:0005904;1.57e-09;4!UBERON:0003133;3.97e-08;44 | |ontology_enrichment_uberon_v019=UBERON:0003135;3.65e-48;11!UBERON:0000473;1.04e-37;8!UBERON:0001301;7.06e-34;1!UBERON:0003101;1.71e-24;22!UBERON:0000079;1.71e-24;22!UBERON:0000991;6.23e-15;21!UBERON:0006947;2.89e-12;3!UBERON:0004054;2.89e-12;3!UBERON:0005904;1.57e-09;4!UBERON:0003133;3.97e-08;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,3.65e-48,11;UBERON:0000473,1.18e-37,8;UBERON:0001301,5.05e-34,1;UBERON:0003101,1.71e-24,22;UBERON:0000079,1.71e-24,22;UBERON:0000991,6.53e-15,21;UBERON:0009196,6.53e-15,21;UBERON:0009117,6.53e-15,21;UBERON:0005564,6.53e-15,21;UBERON:0004176,2.85e-14,22;UBERON:0006947,2.59e-12,3;UBERON:0004054,2.59e-12,3;UBERON:0003133,1.40e-11,48;UBERON:0003886,2.34e-10,54;UBERON:0005904,1.44e-09,4;UBERON:0005156,1.59e-09,59;UBERON:0000990,1.59e-09,59;UBERON:0002553,3.14e-09,61;UBERON:0002323,3.33e-07,46;UBERON:0004458,8.40e-07,49 | |||
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| ||
|short_description=p5@MTPAP | |short_description=p5@MTPAP | ||
}} | }} |
Latest revision as of 21:47, 17 September 2015
Short description: | p5@MTPAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MTPAP_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000471055, NR_003524, uc001ivb.3, uc001ivd.2_5end |
EntrezGene: | 55149,729668 |
HGNC: | 25532 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 3.65e-48 | 11 |
testis | 1.18e-37 | 8 |
epididymis | 5.05e-34 | 1 |
male organism | 1.71e-24 | 22 |
male reproductive system | 1.71e-24 | 22 |
gonad | 6.53e-15 | 21 |
indifferent external genitalia | 6.53e-15 | 21 |
indifferent gonad | 6.53e-15 | 21 |
gonad primordium | 6.53e-15 | 21 |
external genitalia | 2.85e-14 | 22 |
male genital duct | 2.59e-12 | 3 |
internal male genitalia | 2.59e-12 | 3 |
reproductive organ | 1.40e-11 | 48 |
body cavity precursor | 2.34e-10 | 54 |
duct of male reproductive system | 1.44e-09 | 4 |
reproductive structure | 1.59e-09 | 59 |
reproductive system | 1.59e-09 | 59 |
anatomical cavity | 3.14e-09 | 61 |
body cavity | 3.33e-07 | 46 |
body cavity or lining | 8.40e-07 | 49 |