FFCP PHASE1:Hg19::chr4:46391908..46391924,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2555 | |EntrezGene=2555 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4076 | |HGNC=4076 | ||
|TSSclassifier=strong | |||
|UniProt=P47869 | |UniProt=P47869 | ||
|association_with_transcript=20bp_to_ENST00000381620_5end | |association_with_transcript=20bp_to_ENST00000381620_5end | ||
|cluster_id=chr4:46391908..46391924,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_7_at_GABRA2_5end | |description=CAGE_peak_7_at_GABRA2_5end | ||
|id=chr4:46391908..46391924,- | |id=chr4:46391908..46391924,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.70e-14;82!UBERON:0010122;1.31e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.86e-62!57;UBERON:0005068!7.86e-62!57;UBERON:0006241!7.86e-62!57;UBERON:0007135!7.86e-62!57;UBERON:0001017!1.46e-60!82;UBERON:0005743!4.10e-59!86;UBERON:0001893!1.97e-55!34;UBERON:0002020!4.12e-55!34;UBERON:0003528!4.12e-55!34;UBERON:0003075!1.40e-54!86;UBERON:0007284!1.40e-54!86;UBERON:0002780!7.66e-54!41;UBERON:0001890!7.66e-54!41;UBERON:0006240!7.66e-54!41;UBERON:0002616!8.95e-54!59;UBERON:0002791!1.61e-53!33;UBERON:0000955!3.74e-53!69;UBERON:0006238!3.74e-53!69;UBERON:0001869!1.40e-52!32;UBERON:0003080!2.60e-52!42;UBERON:0000073!5.27e-52!94;UBERON:0001016!5.27e-52!94;UBERON:0002346!1.95e-51!90;UBERON:0003056!5.21e-46!61;UBERON:0002619!8.62e-42!22;UBERON:0000956!3.60e-39!25;UBERON:0000203!3.60e-39!25;UBERON:0000033!4.64e-38!123;UBERON:0001950!9.75e-38!20;UBERON:0000153!1.58e-35!129;UBERON:0007811!1.58e-35!129;UBERON:0004121!3.75e-35!169;UBERON:0000924!6.49e-34!173;UBERON:0006601!6.49e-34!173;UBERON:0007023!1.17e-33!115;UBERON:0002420!2.40e-18!9;UBERON:0007245!2.40e-18!9;UBERON:0010009!2.40e-18!9;UBERON:0010011!2.40e-18!9;UBERON:0000454!2.40e-18!9;UBERON:0000064!5.80e-18!219;UBERON:0002308!3.72e-17!9;UBERON:0000125!3.72e-17!9;UBERON:0009663!2.94e-14!7;UBERON:0000483!1.23e-13!309;UBERON:0000119!2.49e-13!312;UBERON:0001871!3.16e-13!7;UBERON:0000200!5.20e-13!6;UBERON:0000025!5.91e-13!194;UBERON:0000349!8.62e-12!5;UBERON:0001872!4.08e-11!5;UBERON:0003076!5.36e-11!15;UBERON:0003057!5.36e-11!15;UBERON:0002021!6.77e-11!5;UBERON:0004111!9.21e-11!241;UBERON:0000481!1.76e-10!347;UBERON:0000475!6.39e-10!365;UBERON:0000369!1.57e-09!4;UBERON:0002435!1.57e-09!4;UBERON:0000204!1.57e-09!4;UBERON:0010082!1.57e-09!4;UBERON:0004733!3.43e-09!12;UBERON:0002028!3.43e-09!12;UBERON:0007277!3.43e-09!12;UBERON:0000477!4.97e-09!286;UBERON:0000062!1.65e-08!511;UBERON:0004732!2.30e-08!13;UBERON:0002298!7.50e-08!8;UBERON:0005383!1.61e-07!3;UBERON:0005382!1.61e-07!3;UBERON:0002771!1.65e-07!3;UBERON:0002680!2.55e-07!9;UBERON:0001895!2.55e-07!9;UBERON:0010092!2.55e-07!9;UBERON:0000059!3.80e-07!11;UBERON:0000922!5.94e-07!612;UBERON:0002050!8.11e-07!605;UBERON:0005423!8.11e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.93e-94;32!UBERON:0002619;9.52e-94;22!UBERON:0002791;4.62e-88;32!UBERON:0001893;5.18e-85;34!UBERON:0001950;2.02e-84;20!UBERON:0000956;2.52e-82;25!UBERON:0000203;2.52e-82;25!UBERON:0003528;1.66e-81;34!UBERON:0002020;1.66e-81;34!UBERON:0002780;1.46e-62;41!UBERON:0001890;1.46e-62;41!UBERON:0000073;1.28e-40;53!UBERON:0002616;1.28e-40;53!UBERON:0000955;3.02e-33;68!UBERON:0001017;1.36e-30;75!UBERON:0000200;1.96e-27;6!UBERON:0002420;1.18e-25;9!UBERON:0007245;1.18e-25;9!UBERON:0010009;1.18e-25;9!UBERON:0010011;1.18e-25;9!UBERON:0000454;1.18e-25;9!UBERON:0000349;9.17e-25;5!UBERON:0001871;2.46e-24;6!UBERON:0001872;2.86e-23;5!UBERON:0001016;5.48e-23;83!UBERON:0002021;1.87e-22;5!UBERON:0000369;1.25e-19;4!UBERON:0002435;1.25e-19;4!UBERON:0000204;1.25e-19;4!UBERON:0009663;5.01e-17;7!UBERON:0005383;4.43e-15;3!UBERON:0005382;4.43e-15;3!UBERON:0001870;1.16e-14;3!UBERON:0000125;3.50e-13;9!UBERON:0002308;3.50e-13;9!UBERON:0007023;1.98e-11;114!UBERON:0001876;4.34e-11;2!UBERON:0011216;4.61e-11;132!UBERON:0001954;7.05e-11;2!UBERON:0003022;7.05e-11;2!UBERON:0002421;7.05e-11;2!UBERON:0002600;7.05e-11;2!UBERON:0002771;1.01e-10;2!UBERON:0001873;1.31e-10;2!UBERON:0002702;3.43e-10;2!UBERON:0010314;2.30e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,9.00e-106,32;UBERON:0001893,2.32e-99,34;UBERON:0002791,3.34e-98,32;UBERON:0002619,6.54e-94,22;UBERON:0003528,3.12e-92,34;UBERON:0002020,3.12e-92,34;UBERON:0002780,6.81e-88,41;UBERON:0001890,6.81e-88,41;UBERON:0003080,6.81e-88,41;UBERON:0006240,6.81e-88,41;UBERON:0001950,1.27e-84,20;UBERON:0000956,1.81e-82,25;UBERON:0000203,1.81e-82,25;UBERON:0000073,1.20e-76,53;UBERON:0002616,1.20e-76,53;UBERON:0001049,3.00e-72,56;UBERON:0005068,3.00e-72,56;UBERON:0006241,3.00e-72,56;UBERON:0007135,3.00e-72,56;UBERON:0000955,4.98e-70,68;UBERON:0006238,4.98e-70,68;UBERON:0003056,9.02e-66,61;UBERON:0001017,3.04e-65,81;UBERON:0001016,4.02e-58,89;UBERON:0003075,4.51e-54,82;UBERON:0007284,4.51e-54,82;UBERON:0002346,2.97e-51,86;UBERON:0010371,5.51e-44,104;UBERON:0010314,2.52e-33,132;UBERON:0004121,1.08e-32,171;UBERON:0000924,1.08e-32,171;UBERON:0006601,1.08e-32,171;UBERON:0007023,1.16e-32,114;UBERON:0000200,1.71e-27,6;UBERON:0002420,1.12e-25,9;UBERON:0007245,1.12e-25,9;UBERON:0010009,1.12e-25,9;UBERON:0010011,1.12e-25,9;UBERON:0000454,1.12e-25,9;UBERON:0000349,1.01e-24,5;UBERON:0001871,3.01e-24,6;UBERON:0011216,2.10e-23,223;UBERON:0001872,3.44e-23,5;UBERON:0002021,1.09e-22,5;UBERON:0000369,1.34e-19,4;UBERON:0002435,1.34e-19,4;UBERON:0000204,1.34e-19,4;UBERON:0010082,1.34e-19,4;UBERON:0009663,4.77e-17,7;UBERON:0000025,2.04e-16,192;UBERON:0005383,4.76e-15,3;UBERON:0005382,4.76e-15,3;UBERON:0001870,7.98e-15,3;UBERON:0000125,3.37e-13,9;UBERON:0002308,3.37e-13,9;UBERON:0000483,6.00e-12,306;UBERON:0004111,9.09e-12,240;UBERON:0000119,9.29e-12,309;UBERON:0001876,4.35e-11,2;UBERON:0001954,7.77e-11,2;UBERON:0003022,7.77e-11,2;UBERON:0002421,7.77e-11,2;UBERON:0002600,7.77e-11,2;UBERON:0002771,1.25e-10,2;UBERON:0001873,1.31e-10,2;UBERON:0010122,1.31e-10,2;UBERON:0002702,2.54e-10,2;UBERON:0000923,6.74e-07,560;UBERON:0010316,6.74e-07,560;UBERON:0005291,6.74e-07,560;UBERON:0006598,6.74e-07,560;UBERON:0010317,6.74e-07,560;UBERON:0002532,6.74e-07,560;UBERON:0002050,8.68e-07,564 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0.61246251376468,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0.686271241194102,0,0,0,0,0,1.03993478527958,1.44331342025273,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,13.9180670687282,7.03347082052564,0,0,0,0.19924798825107,0,1.25966373927138,0,0,0,0,0,0,0,0,0,4.84666373047609,2.41197055220813,0,0,0,0,0,0,0,0,0,0,5.31444831488303,3.25610384288601,1.52581736317083,1.43753037910592,0.886642856860642,1.31631238292384,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0.141353071433941,1.29833183845255,0,0.0884575645033392,0.611030144933625,0,0.123563938946503,0,0.202203398942031,0,3.04543779442941,0,0,0,0,0,2.44858209304392,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0.137041924646751,0,4.81162049264678,0,0,0,0.19980960958213,0,0.687219576995494,0.171594997861965,0,0,0,0,0,1.32597682927218,0,3.60252173225874,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,9.54275627771164,4.22230558945884,0,0,0,0,0,6.01420610914444,0,0.709251365692784,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,2.15292973888239,0,0,0.904980694530854,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,2.65820453990096,9.02994360274527,3.755727921195,0,0.665574309221114,0.869349641179368,0.415045904808692,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04168559533808,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,5.33102568300614,5.6678630530234,1.75597244962866,2.46139637088906,2.52071696221718,1.52145955421279,6.9434527621696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90411613859097,4.68646859168308,3.10030194751776,3.10737469950143,3.28184885410932,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.883606528698812,2.30204707469972,0,0,0,4.55635210756405,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0.707029641304878,0.785233868459781,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,3.19560003897299,4.79985759374415,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.827463966895162,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0.61246251376468,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0.686271241194102,0,0,0,0,0,1.03993478527958,1.44331342025273,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,13.9180670687282,7.03347082052564,0,0,0,0.19924798825107,0,1.25966373927138,0,0,0,0,0,0,0,0,0,4.84666373047609,2.41197055220813,0,0,0,0,0,0,0,0,0,0,5.31444831488303,3.25610384288601,1.52581736317083,1.43753037910592,0.886642856860642,1.31631238292384,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0.141353071433941,1.29833183845255,0,0.0884575645033392,0.611030144933625,0,0.123563938946503,0,0.202203398942031,0,3.04543779442941,0,0,0,0,0,2.44858209304392,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0.137041924646751,0,4.81162049264678,0,0,0,0.19980960958213,0,0.687219576995494,0.171594997861965,0,0,0,0,0,1.32597682927218,0,3.60252173225874,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,9.54275627771164,4.22230558945884,0,0,0,0,0,6.01420610914444,0,0.709251365692784,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,2.15292973888239,0,0,0.904980694530854,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,2.65820453990096,9.02994360274527,3.755727921195,0,0.665574309221114,0.869349641179368,0.415045904808692,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04168559533808,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,5.33102568300614,5.6678630530234,1.75597244962866,2.46139637088906,2.52071696221718,1.52145955421279,6.9434527621696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90411613859097,4.68646859168308,3.10030194751776,3.10737469950143,3.28184885410932,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.883606528698812,2.30204707469972,0,0,0,4.55635210756405,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0.707029641304878,0.785233868459781,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,3.19560003897299,4.79985759374415,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.827463966895162,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p7@GABRA2 | |short_description=p7@GABRA2 | ||
}} | }} |
Latest revision as of 21:38, 17 September 2015
Short description: | p7@GABRA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GABRA2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 20bp_to_ENST00000381620_5end |
EntrezGene: | GABRA2 |
HGNC: | 4076 |
UniProt: | P47869 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data