FFCP PHASE1:Hg19::chr5:39462298..39462311,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1601 | |EntrezGene=1601 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2662 | |HGNC=2662 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_ENST00000509457_5end | |association_with_transcript=-42bp_to_ENST00000509457_5end | ||
|cluster_id=chr5:39462298..39462311,- | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_27_at_DAB2_5end | |description=CAGE_peak_27_at_DAB2_5end | ||
|id=chr5:39462298..39462311,- | |id=chr5:39462298..39462311,- | ||
|ontology_enrichment_celltype=CL:0000148!1.70e-26!10;CL:0000541!1.70e-26!10;CL:0002619!2.43e-22!3;CL:0000147!8.59e-19!14;CL:0000710!5.32e-13!20;CL:0002567!6.47e-11!3;CL:0000075!1.73e-09!27;CL:0002566!5.59e-09!1;CL:0002077!1.17e-07!33;CL:0000235!4.28e-07!10 | |ontology_enrichment_celltype=CL:0000148!1.70e-26!10;CL:0000541!1.70e-26!10;CL:0002619!2.43e-22!3;CL:0000147!8.59e-19!14;CL:0000710!5.32e-13!20;CL:0002567!6.47e-11!3;CL:0000075!1.73e-09!27;CL:0002566!5.59e-09!1;CL:0002077!1.17e-07!33;CL:0000235!4.28e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.15e-59;10!CL:0000147;1.87e-42;14!CL:0000710;9.94e-30;20!CL:0002567;4.35e-23;3!CL:0002619;1.56e-22;3!CL:0000075;5.17e-22;27!CL:0002566;2.66e-18;1!CL:0002077;2.16e-16;34!CL:0000235;5.68e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.67e-59,10;CL:0000541,1.67e-59,10;CL:0000147,1.56e-42,14;CL:0000710,8.78e-30,20;CL:0002567,4.61e-23,3;CL:0002619,1.56e-22,3;CL:0000075,4.72e-22,27;CL:0002566,2.66e-18,1;CL:0002077,1.71e-17,34;CL:0000333,8.37e-14,41;CL:0000235,6.00e-12,6;CL:0000133,1.13e-09,59;CL:0000221,6.25e-08,72 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.02e-18;1 | |||
|ontology_enrichment_disease=DOID:1909!1.08e-15!2 | |ontology_enrichment_disease=DOID:1909!1.08e-15!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;9.46e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.46e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007029!1.84e-08!1;UBERON:0001301!2.13e-08!1;UBERON:0004913!2.29e-08!1;UBERON:0003703!2.29e-08!1;UBERON:0001174!2.29e-08!1;UBERON:0004914!2.29e-08!1;UBERON:0002372!4.07e-08!1;UBERON:0001961!4.07e-08!1;UBERON:0001744!4.07e-08!1;UBERON:0001735!4.07e-08!1 | |ontology_enrichment_uberon=UBERON:0007029!1.84e-08!1;UBERON:0001301!2.13e-08!1;UBERON:0004913!2.29e-08!1;UBERON:0003703!2.29e-08!1;UBERON:0001174!2.29e-08!1;UBERON:0004914!2.29e-08!1;UBERON:0002372!4.07e-08!1;UBERON:0001961!4.07e-08!1;UBERON:0001744!4.07e-08!1;UBERON:0001735!4.07e-08!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p27@DAB2 | |short_description=p27@DAB2 | ||
}} | }} |
Latest revision as of 21:33, 17 September 2015
Short description: | p27@DAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_DAB2_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -42bp_to_ENST00000509457_5end |
EntrezGene: | DAB2 |
HGNC: | 2662 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.67e-59 | 10 |
melanoblast | 1.67e-59 | 10 |
pigment cell | 1.56e-42 | 14 |
neurecto-epithelial cell | 8.78e-30 | 20 |
light melanocyte | 4.61e-23 | 3 |
adult endothelial progenitor cell | 1.56e-22 | 3 |
columnar/cuboidal epithelial cell | 4.72e-22 | 27 |
dark melanocyte | 2.66e-18 | 1 |
ecto-epithelial cell | 1.71e-17 | 34 |
migratory neural crest cell | 8.37e-14 | 41 |
macrophage | 6.00e-12 | 6 |
neurectodermal cell | 1.13e-09 | 59 |
ectodermal cell | 6.25e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.46e-10 | 2 |