FFCP PHASE1:Hg19::chr1:36933719..36933741,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1441 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2439 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-42bp_to_ENST00000484762_5end | |||
|cluster_id=chr1:36933719..36933741,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_4_at_CSF3R_5end | |||
|id=chr1:36933719..36933741,- | |||
|ontology_enrichment_celltype=CL:0000766!4.38e-68!76;CL:0002057!2.42e-63!42;CL:0002194!1.47e-61!63;CL:0000576!1.47e-61!63;CL:0000040!1.47e-61!63;CL:0000559!1.47e-61!63;CL:0002009!3.73e-59!65;CL:0000860!3.84e-58!45;CL:0000763!2.34e-57!112;CL:0000049!2.34e-57!112;CL:0000839!7.09e-56!70;CL:0000557!7.50e-55!71;CL:0000037!1.15e-39!172;CL:0000566!1.15e-39!172;CL:0000988!2.33e-37!182;CL:0000738!2.41e-37!140;CL:0002032!8.71e-37!165;CL:0000837!8.71e-37!165;CL:0002087!6.15e-34!119;CL:0002031!6.62e-29!124;CL:0000094!5.89e-11!8;CL:0002393!1.02e-10!9;CL:0002397!1.02e-10!9;CL:0000134!3.77e-08!358;CL:0002320!1.19e-07!365;CL:0000081!1.45e-07!11;CL:0000775!5.18e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.34e-83;33!CL:0002057;9.34e-83;33!CL:0000473;8.43e-65;39!CL:0000234;8.43e-65;39!CL:0000576;6.69e-61;48!CL:0000766;2.54e-40;69!CL:0000763;8.46e-21;100!CL:0002087;2.00e-14;104!CL:0000094;8.62e-14;8!CL:0000738;2.09e-12;136!CL:0002393;2.21e-11;6!CL:0002397;2.21e-11;6!CL:0000775;7.42e-11;3!CL:0000081;8.25e-10;11!CL:0000988;1.37e-07;177!CL:0000771;2.95e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.82e-98,42;CL:0002057,4.82e-98,42;CL:0000473,1.11e-93,48;CL:0000234,1.11e-93,48;CL:0000766,2.75e-86,72;CL:0002194,4.05e-80,59;CL:0000576,4.05e-80,59;CL:0000040,4.05e-80,59;CL:0000559,4.05e-80,59;CL:0002009,3.65e-77,61;CL:0000839,1.50e-70,66;CL:0000557,2.40e-69,67;CL:0000763,5.04e-61,108;CL:0000049,5.04e-61,108;CL:0000738,4.27e-44,136;CL:0002087,5.66e-40,115;CL:0000037,3.74e-38,168;CL:0002032,7.86e-37,161;CL:0000837,7.86e-37,161;CL:0000988,1.47e-35,177;CL:0002031,5.33e-34,120;CL:0000094,7.14e-14,8;CL:0000134,2.26e-11,354;CL:0002320,6.55e-11,361;CL:0000775,7.43e-11,3;CL:0002393,2.48e-10,9;CL:0002397,2.48e-10,9;CL:0000081,7.22e-10,11;CL:0000219,2.75e-09,386;CL:0000048,2.51e-07,427;CL:0000771,2.66e-07,2;CL:0000723,4.65e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.85e-70;42!CL:0000049;3.31e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.80e-66!102;UBERON:0003061!3.80e-66!102;UBERON:0002193!2.06e-60!112;UBERON:0002371!1.06e-48!80;UBERON:0001474!4.14e-44!86;UBERON:0004765!4.89e-35!101;UBERON:0001434!4.89e-35!101;UBERON:0002405!3.54e-34!115;UBERON:0003081!8.74e-24!216;UBERON:0000178!2.82e-18!15;UBERON:0000179!2.82e-18!15;UBERON:0000463!2.82e-18!15;UBERON:0002204!1.28e-15!167;UBERON:0002384!2.27e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.27e-23;15!UBERON:0000179;5.27e-23;15!UBERON:0000463;5.27e-23;15!UBERON:0002390;5.87e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.61e-75,98;UBERON:0003061,1.61e-75,98;UBERON:0002193,3.30e-70,108;UBERON:0002371,6.64e-60,76;UBERON:0001474,9.49e-55,82;UBERON:0002405,1.58e-49,93;UBERON:0004765,6.18e-49,90;UBERON:0001434,5.75e-43,100;UBERON:0003081,1.00e-32,203;UBERON:0000178,5.82e-23,15;UBERON:0000179,5.82e-23,15;UBERON:0000463,5.82e-23,15;UBERON:0002204,2.20e-21,167;UBERON:0000926,2.24e-16,315;UBERON:0004120,2.24e-16,315;UBERON:0006603,2.24e-16,315;UBERON:0002384,2.80e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,1.70297735647684,0,0,0,0,0,0.293600439334847,2.21598163412751,3.60980005446255,2.82114131930607,1.34349284543955,0.971680998056939,1.03030227053675,8.28769961043519,1.88937971844405,2.66842467306598,6.50801303335917,2.87817521615278,3.09706370895104,9.78154133895312,3.84241059793651,6.85798466676897,6.20542225325913,2.5819387343353,1.35426486594342,12.0475097307267,4.63940455098338,3.82029923556644,8.87643287875617,3.85114832491312,5.11469700639233,8.90598510504134,6.18337338627059,5.11469700639233,12.1887880224005,3.40431134814684,6.85104473895132,11.0549412712967,8.34372669472322,6.5156653411535,6.05399502633369,4.78760926783834,4.1140110367315,1.47878700418359,1.06302149982522,0.628975936525128,4.71780250815279,6.30742949934327,2.57160938715328,0,0.39783335439818,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7204751384914,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.468008530278475,0.594524649154913,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,1.50677127429638,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0.167516265334349,0,88.3828288257675,218.387865218938,43.5136289107837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,4.09856981555372,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7887322147588,0,0,0,0,11.6712950123399,9.1756464857085,17.0894156152249,6.4322579373603,10.6954191002411,13.6179395350471,8.10047155857172,20.621254583651,0,0,0,0,0,0,0,0.59873811429845,0.191505370132367,0.423347165447766,1.29848776109822,1.68478306868075,0.228234679033192,0,0,0,0,0.605399121573143,0.851692475380653,1.03051603426729,0.307240764308458,0.447352215784832,0,0.19538809540204,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69169171316418,1.52587995496613,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.471612915298998,1.65695622138878,2.97699613087171,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640150378164845,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57236873471653,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.657887425858975,0.257831551894309,0,0,0,0,0,0,0.573358332605805,0,0.0679914901909147,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0.202117188958219,0,0,0,0.143444410785353,0,0,0,0,0,2.34640942403454,0.122241444182866,0,0,0,0 | |||
|short_description=p4@CSF3R | |||
}} |
Latest revision as of 21:25, 17 September 2015
Short description: | p4@CSF3R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CSF3R_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -42bp_to_ENST00000484762_5end |
EntrezGene: | CSF3R |
HGNC: | 2439 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.61e-75 | 98 |
blood island | 1.61e-75 | 98 |
hemolymphoid system | 3.30e-70 | 108 |
bone marrow | 6.64e-60 | 76 |
bone element | 9.49e-55 | 82 |
immune system | 1.58e-49 | 93 |
skeletal element | 6.18e-49 | 90 |
skeletal system | 5.75e-43 | 100 |
lateral plate mesoderm | 1.00e-32 | 203 |
blood | 5.82e-23 | 15 |
haemolymphatic fluid | 5.82e-23 | 15 |
organism substance | 5.82e-23 | 15 |
musculoskeletal system | 2.20e-21 | 167 |
mesoderm | 2.24e-16 | 315 |
mesoderm-derived structure | 2.24e-16 | 315 |
presumptive mesoderm | 2.24e-16 | 315 |
connective tissue | 2.80e-10 | 371 |