FFCP PHASE1:Hg19::chr10:29923874..29923879,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6840 | |EntrezGene=6840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11480 | |HGNC=11480 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_uc001iuv.1_5end | |association_with_transcript=2bp_to_uc001iuv.1_5end | ||
|cluster_id=chr10:29923874..29923879,- | |||
|coexpression_cluster_id=C1113 | |||
|description=CAGE_peak_12_at_SVIL_5end | |description=CAGE_peak_12_at_SVIL_5end | ||
|id=chr10:29923874..29923879,- | |id=chr10:29923874..29923879,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.47e-10;65!UBERON:0007297;2.83e-09;2!UBERON:0003104;1.43e-07;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;2.70e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.90e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.11e-20!115;UBERON:0000468!2.53e-12!659;UBERON:0000467!1.36e-10!625;UBERON:0000480!1.67e-10!626;UBERON:0000922!7.84e-09!612;UBERON:0000481!1.44e-08!347;UBERON:0000923!3.88e-08!604;UBERON:0005291!3.88e-08!604;UBERON:0006598!3.88e-08!604;UBERON:0002532!3.88e-08!604;UBERON:0002050!4.65e-08!605;UBERON:0005423!4.65e-08!605;UBERON:0000062!4.89e-07!511 | |ontology_enrichment_uberon=UBERON:0007023!3.11e-20!115;UBERON:0000468!2.53e-12!659;UBERON:0000467!1.36e-10!625;UBERON:0000480!1.67e-10!626;UBERON:0000922!7.84e-09!612;UBERON:0000481!1.44e-08!347;UBERON:0000923!3.88e-08!604;UBERON:0005291!3.88e-08!604;UBERON:0006598!3.88e-08!604;UBERON:0002532!3.88e-08!604;UBERON:0002050!4.65e-08!605;UBERON:0005423!4.65e-08!605;UBERON:0000062!4.89e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.21e-13;25!UBERON:0006947;4.61e-13;3!UBERON:0004054;4.61e-13;3!UBERON:0005904;6.39e-10;4!UBERON:0005090;7.71e-10;2!UBERON:0001630;7.71e-10;2!UBERON:0000341;1.48e-09;2!UBERON:0001155;7.09e-08;9!UBERON:0003978;3.41e-07;3!UBERON:0000946;3.41e-07;3!UBERON:0001723;5.73e-07;3!UBERON:0001033;5.73e-07;3!UBERON:0000948;8.03e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.50e-25,114;UBERON:0006947,4.83e-13,3;UBERON:0004054,4.83e-13,3;UBERON:0007100,5.08e-12,27;UBERON:0005090,5.93e-10,2;UBERON:0001630,5.93e-10,2;UBERON:0005904,6.61e-10,4;UBERON:0000341,9.21e-10,2;UBERON:0003103,1.16e-09,68;UBERON:0001155,6.73e-08,9;UBERON:0003978,3.32e-07,3;UBERON:0009751,3.32e-07,3;UBERON:0000946,3.32e-07,3;UBERON:0002523,3.32e-07,3;UBERON:0005983,3.32e-07,3;UBERON:0002165,3.32e-07,3;UBERON:0002062,3.32e-07,3;UBERON:0007280,3.32e-07,3;UBERON:0001723,5.83e-07,3;UBERON:0001033,5.83e-07,3;UBERON:0010056,5.83e-07,3;UBERON:0004151,8.76e-07,3 | |||
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| ||
|short_description=p12@SVIL | |short_description=p12@SVIL | ||
}} | }} |
Latest revision as of 21:14, 17 September 2015
Short description: | p12@SVIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SVIL_5end |
Coexpression cluster: | C1113_heart_skeletal_smooth_bladder_penis_tongue_diaphragm |
Association with transcript: | 2bp_to_uc001iuv.1_5end |
EntrezGene: | SVIL |
HGNC: | 11480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.50e-25 | 114 |
male genital duct | 4.83e-13 | 3 |
internal male genitalia | 4.83e-13 | 3 |
primary circulatory organ | 5.08e-12 | 27 |
muscle structure | 5.93e-10 | 2 |
muscle organ | 5.93e-10 | 2 |
duct of male reproductive system | 6.61e-10 | 4 |
throat | 9.21e-10 | 2 |
compound organ | 1.16e-09 | 68 |
colon | 6.73e-08 | 9 |
valve | 3.32e-07 | 3 |
cardiac mesenchyme | 3.32e-07 | 3 |
cardial valve | 3.32e-07 | 3 |
tunica intima | 3.32e-07 | 3 |
heart layer | 3.32e-07 | 3 |
endocardium | 3.32e-07 | 3 |
endocardial cushion | 3.32e-07 | 3 |
presumptive endocardium | 3.32e-07 | 3 |
tongue | 5.83e-07 | 3 |
gustatory system | 5.83e-07 | 3 |
future tongue | 5.83e-07 | 3 |
cardiac chamber | 8.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.90e-10 | 2 |