FFCP PHASE1:Hg19::chr19:39402882..39402892,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=643669 | |EntrezGene=643669 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-84bp_to_NM_001243212_5end | |association_with_transcript=-84bp_to_NM_001243212_5end | ||
|cluster_id=chr19:39402882..39402892,- | |||
|coexpression_cluster_id=C347 | |coexpression_cluster_id=C347 | ||
|description=CAGE_peak_3_at_LOC643669_5end | |description=CAGE_peak_3_at_LOC643669_5end | ||
|id=chr19:39402882..39402892,- | |id=chr19:39402882..39402892,- | ||
|ontology_enrichment_celltype=CL:0000047!7.15e-15!8;CL:0000540!7.29e-08!6;CL:0000031!7.29e-08!6;CL:0000404!7.29e-08!6 | |ontology_enrichment_celltype=CL:0000047!7.15e-15!8;CL:0000540!7.29e-08!6;CL:0000031!7.29e-08!6;CL:0000404!7.29e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.78e-30;6!CL:0000404;2.78e-30;6!CL:0002319;4.08e-12;25!CL:0000047;3.34e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.68e-40,8;CL:0000540,2.28e-30,6;CL:0000031,2.28e-30,6;CL:0000404,2.28e-30,6;CL:0002319,3.97e-12,25;CL:0000133,3.01e-08,59;CL:0000221,8.34e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;2.78e-30;6 | |||
|ontology_enrichment_disease=DOID:169!2.55e-07!6;DOID:171!2.59e-07!10 | |ontology_enrichment_disease=DOID:169!2.55e-07!6;DOID:171!2.59e-07!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.79e-35!94;UBERON:0001016!3.79e-35!94;UBERON:0001017!5.61e-33!82;UBERON:0005743!3.44e-31!86;UBERON:0000955!9.73e-23!69;UBERON:0006238!9.73e-23!69;UBERON:0002619!5.88e-21!22;UBERON:0001049!1.42e-20!57;UBERON:0005068!1.42e-20!57;UBERON:0006241!1.42e-20!57;UBERON:0007135!1.42e-20!57;UBERON:0003080!6.77e-20!42;UBERON:0002616!9.47e-20!59;UBERON:0000924!3.76e-19!173;UBERON:0006601!3.76e-19!173;UBERON:0001950!4.27e-19!20;UBERON:0002020!1.74e-18!34;UBERON:0003528!1.74e-18!34;UBERON:0004121!2.68e-18!169;UBERON:0000956!2.76e-18!25;UBERON:0000203!2.76e-18!25;UBERON:0002780!1.37e-17!41;UBERON:0001890!1.37e-17!41;UBERON:0006240!1.37e-17!41;UBERON:0001869!9.10e-17!32;UBERON:0002791!3.35e-16!33;UBERON:0001893!1.15e-15!34;UBERON:0002346!8.73e-15!90;UBERON:0003075!5.63e-14!86;UBERON:0007284!5.63e-14!86;UBERON:0003056!8.90e-13!61;UBERON:0000153!2.81e-11!129;UBERON:0007811!2.81e-11!129;UBERON:0000033!7.91e-11!123;UBERON:0007023!1.20e-10!115;UBERON:0002298!3.81e-09!8;UBERON:0002021!9.01e-09!5;UBERON:0000013!1.06e-08!5;UBERON:0002410!1.06e-08!5;UBERON:0001872!1.49e-08!5 | |ontology_enrichment_uberon=UBERON:0000073!3.79e-35!94;UBERON:0001016!3.79e-35!94;UBERON:0001017!5.61e-33!82;UBERON:0005743!3.44e-31!86;UBERON:0000955!9.73e-23!69;UBERON:0006238!9.73e-23!69;UBERON:0002619!5.88e-21!22;UBERON:0001049!1.42e-20!57;UBERON:0005068!1.42e-20!57;UBERON:0006241!1.42e-20!57;UBERON:0007135!1.42e-20!57;UBERON:0003080!6.77e-20!42;UBERON:0002616!9.47e-20!59;UBERON:0000924!3.76e-19!173;UBERON:0006601!3.76e-19!173;UBERON:0001950!4.27e-19!20;UBERON:0002020!1.74e-18!34;UBERON:0003528!1.74e-18!34;UBERON:0004121!2.68e-18!169;UBERON:0000956!2.76e-18!25;UBERON:0000203!2.76e-18!25;UBERON:0002780!1.37e-17!41;UBERON:0001890!1.37e-17!41;UBERON:0006240!1.37e-17!41;UBERON:0001869!9.10e-17!32;UBERON:0002791!3.35e-16!33;UBERON:0001893!1.15e-15!34;UBERON:0002346!8.73e-15!90;UBERON:0003075!5.63e-14!86;UBERON:0007284!5.63e-14!86;UBERON:0003056!8.90e-13!61;UBERON:0000153!2.81e-11!129;UBERON:0007811!2.81e-11!129;UBERON:0000033!7.91e-11!123;UBERON:0007023!1.20e-10!115;UBERON:0002298!3.81e-09!8;UBERON:0002021!9.01e-09!5;UBERON:0000013!1.06e-08!5;UBERON:0002410!1.06e-08!5;UBERON:0001872!1.49e-08!5 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.57e-10,89;UBERON:0001017,1.64e-08,81 | |||
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| ||
|short_description=p3@LOC643669 | |short_description=p3@LOC643669 | ||
}} | }} |
Latest revision as of 21:02, 17 September 2015
Short description: | p3@LOC643669 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC643669_5end |
Coexpression cluster: | C347_carcinoid_retinoblastoma_neuroblastoma_Mast_Smooth_parietal_Fibroblast |
Association with transcript: | -84bp_to_NM_001243212_5end |
EntrezGene: | LOC643669 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.68e-40 | 8 |
neuron | 2.28e-30 | 6 |
neuroblast | 2.28e-30 | 6 |
electrically signaling cell | 2.28e-30 | 6 |
neural cell | 3.97e-12 | 25 |
neurectodermal cell | 3.01e-08 | 59 |
ectodermal cell | 8.34e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.57e-10 | 89 |
central nervous system | 1.64e-08 | 81 |