FFCP PHASE1:Hg19::chr10:29844110..29844136,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6840 | |EntrezGene=6840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11480 | |HGNC=11480 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-245bp_to_BC172362_5end | |association_with_transcript=-245bp_to_BC172362_5end | ||
|cluster_id=chr10:29844110..29844136,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_18_at_SVIL_5end | |description=CAGE_peak_18_at_SVIL_5end | ||
|id=chr10:29844110..29844136,- | |id=chr10:29844110..29844136,- | ||
|ontology_enrichment_celltype=CL:0002009!2.13e-43!65;CL:0000557!1.27e-41!71;CL:0002194!1.98e-39!63;CL:0000576!1.98e-39!63;CL:0000040!1.98e-39!63;CL:0000559!1.98e-39!63;CL:0000763!3.24e-37!112;CL:0000049!3.24e-37!112;CL:0000839!1.36e-34!70;CL:0000766!3.73e-31!76;CL:0002057!1.43e-29!42;CL:0000860!3.72e-27!45;CL:0000037!1.88e-26!172;CL:0000566!1.88e-26!172;CL:0000738!1.34e-25!140;CL:0000451!2.45e-25!10;CL:0000988!2.68e-24!182;CL:0002032!1.10e-22!165;CL:0000837!1.10e-22!165;CL:0000990!1.46e-20!8;CL:0002087!1.79e-20!119;CL:0002031!1.79e-19!124;CL:0000453!5.62e-15!5;CL:0000840!1.53e-12!5;CL:0001029!1.53e-12!5;CL:0002619!1.31e-08!3;CL:0000134!1.68e-07!358;CL:0002320!3.90e-07!365;CL:0001014!9.62e-07!2;CL:0001016!9.62e-07!2 | |ontology_enrichment_celltype=CL:0002009!2.13e-43!65;CL:0000557!1.27e-41!71;CL:0002194!1.98e-39!63;CL:0000576!1.98e-39!63;CL:0000040!1.98e-39!63;CL:0000559!1.98e-39!63;CL:0000763!3.24e-37!112;CL:0000049!3.24e-37!112;CL:0000839!1.36e-34!70;CL:0000766!3.73e-31!76;CL:0002057!1.43e-29!42;CL:0000860!3.72e-27!45;CL:0000037!1.88e-26!172;CL:0000566!1.88e-26!172;CL:0000738!1.34e-25!140;CL:0000451!2.45e-25!10;CL:0000988!2.68e-24!182;CL:0002032!1.10e-22!165;CL:0000837!1.10e-22!165;CL:0000990!1.46e-20!8;CL:0002087!1.79e-20!119;CL:0002031!1.79e-19!124;CL:0000453!5.62e-15!5;CL:0000840!1.53e-12!5;CL:0001029!1.53e-12!5;CL:0002619!1.31e-08!3;CL:0000134!1.68e-07!358;CL:0002320!3.90e-07!365;CL:0001014!9.62e-07!2;CL:0001016!9.62e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000990;5.91e-44;8!CL:0000860;1.64e-36;33!CL:0002057;1.64e-36;33!CL:0000451;7.56e-36;10!CL:0000473;1.73e-26;39!CL:0000234;1.73e-26;39!CL:0000453;3.59e-26;5!CL:0000840;2.78e-22;5!CL:0000576;6.98e-18;48!CL:0000766;1.42e-11;69!CL:0002032;1.43e-09;1!CL:0000557;1.43e-09;1!CL:0000763;9.53e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,4.46e-44,8;CL:0000557,4.14e-39,67;CL:0000763,1.17e-38,108;CL:0000049,1.17e-38,108;CL:0002009,1.58e-38,61;CL:0000451,6.02e-36,10;CL:0002194,1.86e-35,59;CL:0000576,1.86e-35,59;CL:0000040,1.86e-35,59;CL:0000559,1.86e-35,59;CL:0000839,1.92e-31,66;CL:0000473,8.44e-30,48;CL:0000234,8.44e-30,48;CL:0000860,1.56e-29,42;CL:0002057,1.56e-29,42;CL:0000766,1.29e-28,72;CL:0000453,2.69e-26,5;CL:0002032,8.03e-25,161;CL:0000837,8.03e-25,161;CL:0000037,1.22e-23,168;CL:0000738,2.60e-22,136;CL:0000840,2.72e-22,5;CL:0001029,2.72e-22,5;CL:0000988,2.95e-22,177;CL:0002031,3.30e-18,120;CL:0002087,6.90e-17,115;CL:0000134,3.14e-09,354;CL:0002320,5.66e-09,361;CL:0000219,4.54e-08,386;CL:0000048,5.84e-07,427;CL:0000723,8.31e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;8.34e-21;42!CL:0000049;1.26e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.19e-36!102;UBERON:0003061!1.19e-36!102;UBERON:0002371!7.70e-36!80;UBERON:0002193!3.17e-34!112;UBERON:0001474!1.18e-32!86;UBERON:0002405!1.30e-29!115;UBERON:0004765!2.40e-26!101;UBERON:0001434!2.40e-26!101;UBERON:0003081!3.84e-14!216;UBERON:0002204!5.79e-14!167 | |ontology_enrichment_uberon=UBERON:0002390!1.19e-36!102;UBERON:0003061!1.19e-36!102;UBERON:0002371!7.70e-36!80;UBERON:0002193!3.17e-34!112;UBERON:0001474!1.18e-32!86;UBERON:0002405!1.30e-29!115;UBERON:0004765!2.40e-26!101;UBERON:0001434!2.40e-26!101;UBERON:0003081!3.84e-14!216;UBERON:0002204!5.79e-14!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.39e-09;1!UBERON:0006518;3.39e-09;1!UBERON:0008949;3.39e-09;1!UBERON:0000101;3.39e-09;1!UBERON:0002167;3.39e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.67e-34,76;UBERON:0001474,1.85e-31,82;UBERON:0004765,2.09e-28,90;UBERON:0002405,2.14e-27,93;UBERON:0002390,7.58e-26,98;UBERON:0003061,7.58e-26,98;UBERON:0001434,2.86e-25,100;UBERON:0002193,3.57e-23,108;UBERON:0002204,7.36e-14,167;UBERON:0003081,8.19e-11,203;UBERON:0002171,4.15e-09,1;UBERON:0006518,4.15e-09,1;UBERON:0008949,4.15e-09,1;UBERON:0000101,4.15e-09,1;UBERON:0002167,4.15e-09,1;UBERON:0002384,1.27e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895661896959697,0.32389366601898,0.257575567634187,0,0,0,0.232429036905685,1.23350366406548,1.23882548358041,1.43846196161075,1.7931249457037,0.945928919554341,0,0,0,0,0.545812300115692,0.898893937780338,0.306083892370903,1.28371610830437,0,0.329851300186716,2.39356389145958,1.70489900213078,0.580418477257168,2.8369261234557,1.86846674698672,1.00499466102697,1.5644487552606,0.65156653411535,1.81619850790011,4.41933163185078,0.949387162322653,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,7.46459005405772,11.1443031871531,5.31831842075461,0,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0.936017060556951,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842391534340376,0,0,0,0,0,2.21979677910152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,1.24271716604159,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92290463259083,2.65729680626726,2.78061170234935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0.187967835959707,0.45120521581504,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895661896959697,0.32389366601898,0.257575567634187,0,0,0,0.232429036905685,1.23350366406548,1.23882548358041,1.43846196161075,1.7931249457037,0.945928919554341,0,0,0,0,0.545812300115692,0.898893937780338,0.306083892370903,1.28371610830437,0,0.329851300186716,2.39356389145958,1.70489900213078,0.580418477257168,2.8369261234557,1.86846674698672,1.00499466102697,1.5644487552606,0.65156653411535,1.81619850790011,4.41933163185078,0.949387162322653,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,7.46459005405772,11.1443031871531,5.31831842075461,0,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0.936017060556951,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842391534340376,0,0,0,0,0,2.21979677910152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,1.24271716604159,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92290463259083,2.65729680626726,2.78061170234935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0.187967835959707,0.45120521581504,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p18@SVIL | |short_description=p18@SVIL | ||
}} | }} |
Latest revision as of 21:02, 17 September 2015
Short description: | p18@SVIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SVIL_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | -245bp_to_BC172362_5end |
EntrezGene: | SVIL |
HGNC: | 11480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.67e-34 | 76 |
bone element | 1.85e-31 | 82 |
skeletal element | 2.09e-28 | 90 |
immune system | 2.14e-27 | 93 |
hematopoietic system | 7.58e-26 | 98 |
blood island | 7.58e-26 | 98 |
skeletal system | 2.86e-25 | 100 |
hemolymphoid system | 3.57e-23 | 108 |
musculoskeletal system | 7.36e-14 | 167 |
lateral plate mesoderm | 8.19e-11 | 203 |
lower lobe of right lung | 4.15e-09 | 1 |
right lung lobe | 4.15e-09 | 1 |
lower lobe of lung | 4.15e-09 | 1 |
lobe of lung | 4.15e-09 | 1 |
right lung | 4.15e-09 | 1 |
connective tissue | 1.27e-08 | 371 |