FFCP PHASE1:Hg19::chr1:158323639..158323693,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=913 | |EntrezGene=913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1638 | |HGNC=1638 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000368165,ENST00000368166_5end | |association_with_transcript=0bp_to_ENST00000368165,ENST00000368166_5end | ||
|cluster_id=chr1:158323639..158323693,+ | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_1_at_CD1E_5end | |description=CAGE_peak_1_at_CD1E_5end | ||
|id=chr1:158323639..158323693,+ | |id=chr1:158323639..158323693,+ | ||
|ontology_enrichment_celltype=CL:0000990;1.43e-22;8!CL:0000451;2.83e-18;10!CL:0000840;5.33e-18;5!CL:0000453;6.90e-14;5!CL:0001014;1.15e-09;2!CL:0001016;1.15e-09;2 | |ontology_enrichment_celltype=CL:0000738!2.91e-24!140;CL:0000037!4.12e-20!172;CL:0000566!4.12e-20!172;CL:0000557!4.09e-19!71;CL:0000766!2.60e-18!76;CL:0000988!4.75e-18!182;CL:0002009!8.62e-18!65;CL:0000763!1.87e-17!112;CL:0000049!1.87e-17!112;CL:0002032!7.11e-17!165;CL:0000837!7.11e-17!165;CL:0002057!9.97e-17!42;CL:0000839!1.47e-16!70;CL:0002031!1.89e-16!124;CL:0002087!1.20e-15!119;CL:0002194!1.27e-15!63;CL:0000576!1.27e-15!63;CL:0000040!1.27e-15!63;CL:0000559!1.27e-15!63;CL:0000860!3.94e-15!45;CL:0000990!8.51e-13!8;CL:0000451!1.84e-12!10;CL:0000453!2.08e-09!5;CL:0000840!1.56e-08!5;CL:0001029!1.56e-08!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0000990;1.43e-22;8!CL:0000451;2.83e-18;10!CL:0000840;5.33e-18;5!CL:0000453;6.90e-14;5!CL:0001014;1.15e-09;2!CL:0001016;1.15e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000990,1.49e-22,8;CL:0000451,2.92e-18,10;CL:0000840,5.36e-18,5;CL:0001029,5.36e-18,5;CL:0000453,7.16e-14,5;CL:0000738,2.40e-13,136;CL:0000037,1.17e-10,168;CL:0000988,8.30e-10,177;CL:0001014,1.15e-09,2;CL:0001016,1.15e-09,2;CL:0002032,1.92e-08,161;CL:0000837,1.92e-08,161;CL:0002009,4.29e-08,61;CL:0002087,8.91e-08,115;CL:0000763,1.23e-07,108;CL:0000049,1.23e-07,108;CL:0002031,1.83e-07,120;CL:0000557,3.81e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;1.36e-11;15!UBERON:0000179;1.36e-11;15!UBERON:0000463;1.36e-11;15!UBERON:0002370;6.61e-10;2!UBERON:0005058;6.61e-10;2!UBERON:0009113;6.61e-10;2!UBERON:0002390;1.59e-09;32!UBERON:0000341;5.04e-09;2!UBERON:0004177;2.10e-08;5!UBERON:0005057;2.10e-08;5 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.03e-27!102;UBERON:0003061!1.03e-27!102;UBERON:0002193!2.75e-25!112;UBERON:0002371!8.12e-16!80;UBERON:0001474!5.09e-14!86;UBERON:0007023!8.98e-14!115;UBERON:0002405!4.28e-13!115;UBERON:0003081!5.29e-12!216;UBERON:0000178!7.11e-12!15;UBERON:0000179!7.11e-12!15;UBERON:0000463!7.11e-12!15;UBERON:0004765!2.46e-11!101;UBERON:0001434!2.46e-11!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.36e-11;15!UBERON:0000179;1.36e-11;15!UBERON:0000463;1.36e-11;15!UBERON:0002370;6.61e-10;2!UBERON:0005058;6.61e-10;2!UBERON:0009113;6.61e-10;2!UBERON:0002390;1.59e-09;32!UBERON:0000341;5.04e-09;2!UBERON:0004177;2.10e-08;5!UBERON:0005057;2.10e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.39e-15,98;UBERON:0003061,1.39e-15,98;UBERON:0002193,3.87e-15,108;UBERON:0000178,1.90e-11,15;UBERON:0000179,1.90e-11,15;UBERON:0000463,1.90e-11,15;UBERON:0000341,3.51e-09,2;UBERON:0002405,1.70e-08,93;UBERON:0000974,5.96e-07,10;UBERON:0001042,6.14e-07,10;UBERON:0009145,6.14e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,1.18009283054671,0.767658796194425,2.16742572642506,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.651032612147555,0,0,0,0.145398238779565,1.13362783106643,0.242584061187816,0.232429036905685,0.411167888021826,0.309706370895104,0,0.256160706529101,0.236482229888585,0.344745680736619,0,1.35426486594342,0,0.272906150057846,0.674170453335254,0,0,0,0,0.199463657621632,0,0,0,0,0.502497330513487,0.521482918420201,0,0,0.368277635987565,0,2.5350634357433,0.637812899895131,2.09658645508376,2.47122988522289,1.20141514273205,1.44653028027372,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50575119077773,1.53583933385302,1.24930726552346,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.589405839739707,0,0,105.802450331427,104.826101854159,261.129434459051,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.9219077192218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.702012795417713,1.0404181360211,0,0,0,0,0,0,0,0,0.621984346622316,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,1.70453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.74558745249375,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0.507447609232169,0,1.13929437434833,1.90585420366231,0.822724546172388,0.648473311192717,1.08006287447623,1.58625035258854,0,0,0,0,0,311.103280962615,2.55082036366116,0,1.53204296105893,0,0,0,0,0.156679895773023,0,0,0.321176150207399,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0.19924798825107,1.93398740871803,0,0,0,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,110.368762051395,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581934098930517,0,0,0,0,0,0,0,4.4825128895264,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,115.636580257471,59.5827505009621,0,0,1.10327990218877,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.427149650270779,0.471612915298998,3.72815149812476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.20983142705737,3.18875616752071,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.39246546425257,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0.860454717640555,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,1.94284397223656,0,0,0,0,0,0,0.385870790539723,0.655678681511872,0,0.490296643507811,0,0,0,0,0,0.0939839179798536,4.89879948599187,0,0,0,0,2.19100916473955,1.83491713361816,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,1.91910583710883,14.7599947507519,673.597740679708,485.982938222272,0,0,0.404234377916439,2.17716747896961,0,2.96349033264185,0.143444410785353,0,0,0,0,0,0,0.611207220914332,0,0,77.2891367389541,0 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| ||
|short_description=p1@CD1E | |short_description=p1@CD1E | ||
}} | }} |
Latest revision as of 21:00, 17 September 2015
Short description: | p1@CD1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD1E_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 0bp_to_ENST00000368165, ENST00000368166_5end |
EntrezGene: | CD1E |
HGNC: | 1638 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 1.49e-22 | 8 |
dendritic cell | 2.92e-18 | 10 |
immature conventional dendritic cell | 5.36e-18 | 5 |
common dendritic progenitor | 5.36e-18 | 5 |
Langerhans cell | 7.16e-14 | 5 |
leukocyte | 2.40e-13 | 136 |
hematopoietic stem cell | 1.17e-10 | 168 |
hematopoietic cell | 8.30e-10 | 177 |
CD1a-positive Langerhans cell | 1.15e-09 | 2 |
immature CD1a-positive Langerhans cell | 1.15e-09 | 2 |
hematopoietic oligopotent progenitor cell | 1.92e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.92e-08 | 161 |
macrophage dendritic cell progenitor | 4.29e-08 | 61 |
nongranular leukocyte | 8.91e-08 | 115 |
myeloid cell | 1.23e-07 | 108 |
common myeloid progenitor | 1.23e-07 | 108 |
hematopoietic lineage restricted progenitor cell | 1.83e-07 | 120 |
granulocyte monocyte progenitor cell | 3.81e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.39e-15 | 98 |
blood island | 1.39e-15 | 98 |
hemolymphoid system | 3.87e-15 | 108 |
blood | 1.90e-11 | 15 |
haemolymphatic fluid | 1.90e-11 | 15 |
organism substance | 1.90e-11 | 15 |
throat | 3.51e-09 | 2 |
immune system | 1.70e-08 | 93 |
neck | 5.96e-07 | 10 |
chordate pharynx | 6.14e-07 | 10 |
pharyngeal region of foregut | 6.14e-07 | 10 |