FFCP PHASE1:Hg19::chr2:162281180..162281191,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57282 | |EntrezGene=57282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13811 | |HGNC=13811 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=337bp_to_ENST00000482861_5end | |association_with_transcript=337bp_to_ENST00000482861_5end | ||
|cluster_id=chr2:162281180..162281191,+ | |||
|coexpression_cluster_id=C1396 | |coexpression_cluster_id=C1396 | ||
|description=CAGE_peak_8_at_SLC4A10_5end | |description=CAGE_peak_8_at_SLC4A10_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.42e-11;10 | |ontology_enrichment_development_v019=UBERON:0006238;2.42e-11;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p8@SLC4A10 | |short_description=p8@SLC4A10 | ||
}} | }} |
Latest revision as of 20:47, 17 September 2015
Short description: | p8@SLC4A10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLC4A10_5end |
Coexpression cluster: | C1396_brain_medial_parietal_occipital_Neurons_medulloblastoma_olfactory |
Association with transcript: | 337bp_to_ENST00000482861_5end |
EntrezGene: | SLC4A10 |
HGNC: | 13811 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parietal lobe | 2.54e-23 | 5 |
neocortex | 5.79e-22 | 20 |
regional part of cerebral cortex | 4.14e-20 | 22 |
cerebral cortex | 7.34e-18 | 25 |
pallium | 7.34e-18 | 25 |
central nervous system | 6.63e-17 | 81 |
middle temporal gyrus | 1.33e-15 | 2 |
nervous system | 2.81e-15 | 89 |
brain | 8.34e-15 | 68 |
future brain | 8.34e-15 | 68 |
regional part of telencephalon | 3.41e-14 | 32 |
cerebral hemisphere | 3.41e-14 | 32 |
brain grey matter | 2.05e-13 | 34 |
gray matter | 2.05e-13 | 34 |
telencephalon | 2.05e-13 | 34 |
regional part of forebrain | 2.90e-11 | 41 |
forebrain | 2.90e-11 | 41 |
anterior neural tube | 2.90e-11 | 41 |
future forebrain | 2.90e-11 | 41 |
regional part of nervous system | 7.27e-09 | 53 |
regional part of brain | 7.27e-09 | 53 |
neural tube | 2.02e-08 | 56 |
neural rod | 2.02e-08 | 56 |
future spinal cord | 2.02e-08 | 56 |
neural keel | 2.02e-08 | 56 |
ectoderm-derived structure | 3.72e-08 | 171 |
ectoderm | 3.72e-08 | 171 |
presumptive ectoderm | 3.72e-08 | 171 |
pre-chordal neural plate | 8.93e-08 | 61 |
occipital lobe | 5.38e-07 | 5 |