FFCP PHASE1:Hg19::chr2:162280765..162280777,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57282 | |EntrezGene=57282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13811 | |HGNC=13811 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-65bp_to_ENST00000482861_5end | |association_with_transcript=-65bp_to_ENST00000482861_5end | ||
|cluster_id=chr2:162280765..162280777,+ | |||
|coexpression_cluster_id=C1173 | |||
|description=CAGE_peak_6_at_SLC4A10_5end | |description=CAGE_peak_6_at_SLC4A10_5end | ||
|id=chr2:162280765..162280777,+ | |id=chr2:162280765..162280777,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.20e-08!6;CL:0000031!1.20e-08!6;CL:0000404!1.20e-08!6 | |ontology_enrichment_celltype=CL:0000540!1.20e-08!6;CL:0000031!1.20e-08!6;CL:0000404!1.20e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.61e-17;6!CL:0000404;1.61e-17;6!CL:0002319;6.28e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.70e-17,6;CL:0000031,1.70e-17,6;CL:0000404,1.70e-17,6;CL:0000047,2.83e-13,8;CL:0002319,6.38e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;1.61e-17;6 | |||
|ontology_enrichment_disease=DOID:154!3.88e-11!2;DOID:4236!3.88e-11!2 | |ontology_enrichment_disease=DOID:154!3.88e-11!2;DOID:4236!3.88e-11!2 | ||
|ontology_enrichment_disease_v019=DOID:154;9.53e-07;2!DOID:4236;9.53e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,9.02e-07,2;DOID:4236,9.02e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001950!2.88e-75!20;UBERON:0002619!2.29e-68!22;UBERON:0000956!1.05e-66!25;UBERON:0000203!1.05e-66!25;UBERON:0001869!1.70e-63!32;UBERON:0001893!1.36e-59!34;UBERON:0002791!1.61e-55!33;UBERON:0002020!8.40e-54!34;UBERON:0003528!8.40e-54!34;UBERON:0002780!1.04e-53!41;UBERON:0001890!1.04e-53!41;UBERON:0006240!1.04e-53!41;UBERON:0003080!2.40e-52!42;UBERON:0001017!5.87e-42!82;UBERON:0005743!9.00e-40!86;UBERON:0000955!1.85e-39!69;UBERON:0006238!1.85e-39!69;UBERON:0001049!1.64e-37!57;UBERON:0005068!1.64e-37!57;UBERON:0006241!1.64e-37!57;UBERON:0007135!1.64e-37!57;UBERON:0002616!4.29e-36!59;UBERON:0000073!1.64e-35!94;UBERON:0001016!1.64e-35!94;UBERON:0003056!9.09e-35!61;UBERON:0000200!7.95e-31!6;UBERON:0001872!3.47e-26!5;UBERON:0003075!2.45e-23!86;UBERON:0007284!2.45e-23!86;UBERON:0001871!1.31e-22!7;UBERON:0002346!4.31e-22!90;UBERON:0000033!7.11e-22!123;UBERON:0000153!1.31e-20!129;UBERON:0007811!1.31e-20!129;UBERON:0004121!2.39e-17!169;UBERON:0000924!8.18e-17!173;UBERON:0006601!8.18e-17!173;UBERON:0002021!1.14e-16!5;UBERON:0002771!2.92e-16!3;UBERON:0007023!1.04e-14!115;UBERON:0001870!2.57e-11!2;UBERON:0000025!1.00e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001872;1.66e-54;5!UBERON:0001950;5.17e-51;20!UBERON:0002619;1.76e-46;22!UBERON:0000956;5.45e-41;25!UBERON:0000203;5.45e-41;25!UBERON:0001869;1.34e-35;32!UBERON:0001893;4.34e-32;34!UBERON:0000200;8.58e-30;6!UBERON:0002791;6.23e-29;32!UBERON:0003528;1.01e-28;34!UBERON:0002020;1.01e-28;34!UBERON:0002780;2.16e-20;41!UBERON:0001890;2.16e-20;41!UBERON:0000073;2.21e-14;53!UBERON:0002616;2.21e-14;53!UBERON:0001017;6.38e-13;75!UBERON:0002581;3.08e-12;1!UBERON:0007190;3.08e-12;1!UBERON:0001016;4.40e-12;83!UBERON:0002021;8.12e-10;5!UBERON:0000955;8.21e-10;68!UBERON:0001871;2.52e-07;6!UBERON:0002771;4.55e-07;2!UBERON:0002702;6.80e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,2.08e-54,5;UBERON:0001950,5.47e-51,20;UBERON:0002619,1.85e-46,22;UBERON:0000956,5.69e-41,25;UBERON:0000203,5.69e-41,25;UBERON:0001869,9.96e-39,32;UBERON:0001893,1.94e-36,34;UBERON:0002791,4.90e-32,32;UBERON:0001017,5.32e-32,81;UBERON:0002780,3.85e-30,41;UBERON:0001890,3.85e-30,41;UBERON:0003080,3.85e-30,41;UBERON:0006240,3.85e-30,41;UBERON:0003528,3.87e-30,34;UBERON:0002020,3.87e-30,34;UBERON:0000200,1.16e-29,6;UBERON:0001016,1.12e-28,89;UBERON:0000955,8.39e-25,68;UBERON:0006238,8.39e-25,68;UBERON:0000073,3.92e-23,53;UBERON:0002616,3.92e-23,53;UBERON:0001049,7.69e-22,56;UBERON:0005068,7.69e-22,56;UBERON:0006241,7.69e-22,56;UBERON:0007135,7.69e-22,56;UBERON:0003056,5.80e-20,61;UBERON:0003075,1.54e-14,82;UBERON:0007284,1.54e-14,82;UBERON:0004121,3.56e-14,171;UBERON:0000924,3.56e-14,171;UBERON:0006601,3.56e-14,171;UBERON:0002346,8.39e-14,86;UBERON:0007190,3.85e-12,1;UBERON:0002581,4.31e-12,1;UBERON:0011216,6.31e-12,223;UBERON:0010371,3.55e-11,104;UBERON:0002021,9.70e-10,5;UBERON:0010314,1.70e-08,132;UBERON:0001871,2.22e-07,6;UBERON:0002771,4.56e-07,2;UBERON:0002702,6.42e-07,2 | |||
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|short_description=p6@SLC4A10 | |short_description=p6@SLC4A10 | ||
}} | }} |
Latest revision as of 20:47, 17 September 2015
Short description: | p6@SLC4A10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC4A10_5end |
Coexpression cluster: | C1173_medial_Neurons_parietal_temporal_medulloblastoma_occipital_duodenum |
Association with transcript: | -65bp_to_ENST00000482861_5end |
EntrezGene: | SLC4A10 |
HGNC: | 13811 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.70e-17 | 6 |
neuroblast | 1.70e-17 | 6 |
electrically signaling cell | 1.70e-17 | 6 |
neuronal stem cell | 2.83e-13 | 8 |
neural cell | 6.38e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 9.02e-07 | 2 |
carcinosarcoma | 9.02e-07 | 2 |