FFCP PHASE1:Hg19::chr13:64385967..64385986,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42008 | |HGNC=42008 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-226bp_to_ENST00000393023_5end | |association_with_transcript=-226bp_to_ENST00000393023_5end | ||
|cluster_id=chr13:64385967..64385986,- | |||
|coexpression_cluster_id=C2268 | |coexpression_cluster_id=C2268 | ||
|description=CAGE_peak_1_at_PPP1R2P10_5end | |description=CAGE_peak_1_at_PPP1R2P10_5end | ||
|id=chr13:64385967..64385986,- | |id=chr13:64385967..64385986,- | ||
|ontology_enrichment_celltype=CL:0000054!2.22e-10!2;CL:0000137!2.22e-10!2;CL:0000092!2.22e-10!2;CL:0002605!5.31e-07!3 | |ontology_enrichment_celltype=CL:0000054!2.22e-10!2;CL:0000137!2.22e-10!2;CL:0000092!2.22e-10!2;CL:0002605!5.31e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;6.13e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,5.93e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.32e-18;10!UBERON:0005564;1.32e-18;10 | |||
|ontology_enrichment_disease=DOID:200!2.22e-10!2;DOID:4305!2.22e-10!2 | |ontology_enrichment_disease=DOID:200!2.22e-10!2;DOID:4305!2.22e-10!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!3.68e-07!11;UBERON:0001049!5.37e-07!57;UBERON:0005068!5.37e-07!57;UBERON:0006241!5.37e-07!57;UBERON:0007135!5.37e-07!57 | |ontology_enrichment_uberon=UBERON:0003135!3.68e-07!11;UBERON:0001049!5.37e-07!57;UBERON:0005068!5.37e-07!57;UBERON:0006241!5.37e-07!57;UBERON:0007135!5.37e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.59e-23;8!UBERON:0001282;1.88e-21;1!UBERON:0009842;1.88e-21;1!UBERON:0003704;1.88e-21;1!UBERON:0001171;1.88e-21;1!UBERON:0001172;1.88e-21;1!UBERON:0003135;5.55e-17;11!UBERON:0001905;3.89e-11;2!UBERON:0002757;3.89e-11;2!UBERON:0010134;3.89e-11;2!UBERON:0005408;3.89e-11;2!UBERON:0001899;3.89e-11;2!UBERON:0000991;3.30e-09;21!UBERON:0003101;8.14e-09;22!UBERON:0000079;8.14e-09;22!UBERON:0001280;4.84e-08;3!UBERON:0004647;4.84e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.42e-23,8;UBERON:0001282,1.88e-21,1;UBERON:0009842,1.88e-21,1;UBERON:0003704,1.88e-21,1;UBERON:0001171,1.88e-21,1;UBERON:0001172,1.88e-21,1;UBERON:0003135,5.40e-17,11;UBERON:0001905,3.35e-11,2;UBERON:0002757,3.35e-11,2;UBERON:0010134,3.35e-11,2;UBERON:0005408,3.35e-11,2;UBERON:0001899,3.35e-11,2;UBERON:0000991,3.26e-09,21;UBERON:0009196,3.26e-09,21;UBERON:0009117,3.26e-09,21;UBERON:0005564,3.26e-09,21;UBERON:0004176,8.03e-09,22;UBERON:0003101,8.03e-09,22;UBERON:0000079,8.03e-09,22;UBERON:0001280,4.84e-08,3;UBERON:0004647,4.84e-08,3;UBERON:0005171,4.84e-08,3 | |||
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| ||
|short_description=p1@PPP1R2P10 | |short_description=p1@PPP1R2P10 | ||
}} | }} |
Latest revision as of 20:46, 17 September 2015
Short description: | p1@PPP1R2P10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPP1R2P10_5end |
Coexpression cluster: | C2268_cholangiocellular_testis_bronchioalveolar_gall_squamous_chronic_gastric |
Association with transcript: | -226bp_to_ENST00000393023_5end |
EntrezGene: | NA |
HGNC: | 42008 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 4.42e-23 | 8 |
intralobular bile duct | 1.88e-21 | 1 |
acinus | 1.88e-21 | 1 |
intrahepatic bile duct | 1.88e-21 | 1 |
portal lobule | 1.88e-21 | 1 |
hepatic acinus | 1.88e-21 | 1 |
male reproductive organ | 5.40e-17 | 11 |
pineal body | 3.35e-11 | 2 |
regional part of epithalamus | 3.35e-11 | 2 |
secretory circumventricular organ | 3.35e-11 | 2 |
circumventricular organ | 3.35e-11 | 2 |
epithalamus | 3.35e-11 | 2 |
gonad | 3.26e-09 | 21 |
indifferent external genitalia | 3.26e-09 | 21 |
indifferent gonad | 3.26e-09 | 21 |
gonad primordium | 3.26e-09 | 21 |
external genitalia | 8.03e-09 | 22 |
male organism | 8.03e-09 | 22 |
male reproductive system | 8.03e-09 | 22 |
liver parenchyma | 4.84e-08 | 3 |
liver lobule | 4.84e-08 | 3 |
hepatic duct | 4.84e-08 | 3 |