FFCP PHASE1:Hg19::chr12:22697108..22697172,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:22697108..22697172,- to FFCP PHASE1:Hg19::chr12:22697108..22697172,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9847 | |EntrezGene=9847 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29062 | |HGNC=29062 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000535304_5end | |||
|cluster_id=chr12:22697108..22697172,- | |||
|description=CAGE_peak_1_at_KIAA0528_5end | |||
|id=chr12:22697108..22697172,- | |||
|ontology_enrichment_celltype=CL:0000542!4.92e-13!53;CL:0000051!4.92e-13!53;CL:0000838!6.40e-13!52;CL:0000738!1.62e-08!140;CL:0000037!2.63e-08!172;CL:0000566!2.63e-08!172;CL:0000791!8.60e-08!18;CL:0000789!8.60e-08!18;CL:0002420!8.60e-08!18;CL:0002419!8.60e-08!18;CL:0000790!8.60e-08!18;CL:0002087!1.84e-07!119;CL:0002031!2.06e-07!124;CL:0000945!5.94e-07!24;CL:0000826!5.94e-07!24;CL:0002032!5.94e-07!165;CL:0000837!5.94e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000542;4.75e-08;53!CL:0000791;8.41e-08;18!CL:0000789;8.41e-08;18!CL:0002419;8.41e-08;18!CL:0000945;7.35e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.69e-13,53;CL:0000051,4.69e-13,53;CL:0000838,6.10e-13,52;CL:0000738,6.65e-09,136;CL:0000037,1.25e-08,168;CL:0002087,6.34e-08,115;CL:0002031,7.36e-08,120;CL:0000791,8.38e-08,18;CL:0000789,8.38e-08,18;CL:0002420,8.38e-08,18;CL:0002419,8.38e-08,18;CL:0000790,8.38e-08,18;CL:0002032,3.07e-07,161;CL:0000837,3.07e-07,161;CL:0000945,5.80e-07,24;CL:0000826,5.80e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;4.75e-08;53!CL:0000790;8.41e-08;18!UBERON:0006601;2.64e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.67e-32!115;UBERON:0001049!1.68e-21!57;UBERON:0005068!1.68e-21!57;UBERON:0006241!1.68e-21!57;UBERON:0007135!1.68e-21!57;UBERON:0002780!2.19e-20!41;UBERON:0001890!2.19e-20!41;UBERON:0006240!2.19e-20!41;UBERON:0003080!5.85e-20!42;UBERON:0001017!9.85e-19!82;UBERON:0002616!1.97e-18!59;UBERON:0000955!6.10e-18!69;UBERON:0006238!6.10e-18!69;UBERON:0005743!6.46e-18!86;UBERON:0001893!6.76e-18!34;UBERON:0002020!1.02e-17!34;UBERON:0003528!1.02e-17!34;UBERON:0000073!1.64e-17!94;UBERON:0001016!1.64e-17!94;UBERON:0002791!3.12e-17!33;UBERON:0001869!3.79e-17!32;UBERON:0002619!1.38e-14!22;UBERON:0000956!8.51e-14!25;UBERON:0000203!8.51e-14!25;UBERON:0001950!1.69e-13!20;UBERON:0003075!1.80e-10!86;UBERON:0007284!1.80e-10!86;UBERON:0002346!2.14e-10!90;UBERON:0003056!8.68e-10!61;UBERON:0000153!3.72e-09!129;UBERON:0007811!3.72e-09!129;UBERON:0000033!9.30e-08!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.59e-15;34!UBERON:0001869;1.79e-15;32!UBERON:0003528;2.82e-15;34!UBERON:0002020;2.82e-15;34!UBERON:0002791;2.92e-15;32!UBERON:0002780;6.34e-15;41!UBERON:0001890;6.34e-15;41!UBERON:0002619;1.17e-14;22!UBERON:0000956;7.27e-14;25!UBERON:0000203;7.27e-14;25!UBERON:0001950;1.47e-13;20!UBERON:0000073;6.60e-13;53!UBERON:0002616;6.60e-13;53!UBERON:0007023;2.09e-09;114!UBERON:0000955;4.26e-09;68!UBERON:0001017;8.01e-09;75!UBERON:0001016;1.00e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.01e-31,114;UBERON:0001049,6.64e-22,56;UBERON:0005068,6.64e-22,56;UBERON:0006241,6.64e-22,56;UBERON:0007135,6.64e-22,56;UBERON:0000073,5.71e-21,53;UBERON:0002616,5.71e-21,53;UBERON:0002780,2.03e-20,41;UBERON:0001890,2.03e-20,41;UBERON:0003080,2.03e-20,41;UBERON:0006240,2.03e-20,41;UBERON:0001017,6.00e-19,81;UBERON:0001016,2.02e-18,89;UBERON:0000955,3.49e-18,68;UBERON:0006238,3.49e-18,68;UBERON:0001893,6.31e-18,34;UBERON:0003528,9.53e-18,34;UBERON:0002020,9.53e-18,34;UBERON:0001869,3.55e-17,32;UBERON:0002791,7.02e-17,32;UBERON:0002619,1.31e-14,22;UBERON:0000956,8.08e-14,25;UBERON:0000203,8.08e-14,25;UBERON:0001950,1.60e-13,20;UBERON:0003075,2.97e-11,82;UBERON:0007284,2.97e-11,82;UBERON:0002346,3.82e-11,86;UBERON:0003056,5.70e-10,61;UBERON:0011216,5.74e-09,223 | |||
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| ||
|short_description=p1@KIAA0528 | |||
}} | }} |
Latest revision as of 20:32, 17 September 2015
Short description: | p1@KIAA0528 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIAA0528_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000535304_5end |
EntrezGene: | KIAA0528 |
HGNC: | 29062 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.69e-13 | 53 |
common lymphoid progenitor | 4.69e-13 | 53 |
lymphoid lineage restricted progenitor cell | 6.10e-13 | 52 |
leukocyte | 6.65e-09 | 136 |
hematopoietic stem cell | 1.25e-08 | 168 |
nongranular leukocyte | 6.34e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 7.36e-08 | 120 |
mature alpha-beta T cell | 8.38e-08 | 18 |
alpha-beta T cell | 8.38e-08 | 18 |
immature T cell | 8.38e-08 | 18 |
mature T cell | 8.38e-08 | 18 |
immature alpha-beta T cell | 8.38e-08 | 18 |
hematopoietic oligopotent progenitor cell | 3.07e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.07e-07 | 161 |
lymphocyte of B lineage | 5.80e-07 | 24 |
pro-B cell | 5.80e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.01e-31 | 114 |
neural tube | 6.64e-22 | 56 |
neural rod | 6.64e-22 | 56 |
future spinal cord | 6.64e-22 | 56 |
neural keel | 6.64e-22 | 56 |
regional part of nervous system | 5.71e-21 | 53 |
regional part of brain | 5.71e-21 | 53 |
regional part of forebrain | 2.03e-20 | 41 |
forebrain | 2.03e-20 | 41 |
anterior neural tube | 2.03e-20 | 41 |
future forebrain | 2.03e-20 | 41 |
central nervous system | 6.00e-19 | 81 |
nervous system | 2.02e-18 | 89 |
brain | 3.49e-18 | 68 |
future brain | 3.49e-18 | 68 |
telencephalon | 6.31e-18 | 34 |
brain grey matter | 9.53e-18 | 34 |
gray matter | 9.53e-18 | 34 |
cerebral hemisphere | 3.55e-17 | 32 |
regional part of telencephalon | 7.02e-17 | 32 |
regional part of cerebral cortex | 1.31e-14 | 22 |
cerebral cortex | 8.08e-14 | 25 |
pallium | 8.08e-14 | 25 |
neocortex | 1.60e-13 | 20 |
neural plate | 2.97e-11 | 82 |
presumptive neural plate | 2.97e-11 | 82 |
neurectoderm | 3.82e-11 | 86 |
pre-chordal neural plate | 5.70e-10 | 61 |
organ system subdivision | 5.74e-09 | 223 |