FFCP PHASE1:Hg19::chr6:31324641..31324664,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:31324641..31324664,-
|short_description=p10@HLA-B
|description=CAGE_peak_10_at_HLA-B_5end
|association_with_transcript=17bp_to_ENST00000474381_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3106 | |EntrezGene=3106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4932 | |HGNC=4932 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000474381_5end | |||
|cluster_id=chr6:31324641..31324664,- | |||
|coexpression_cluster_id=C500 | |||
|description=CAGE_peak_10_at_HLA-B_5end | |||
|id=chr6:31324641..31324664,- | |||
|ontology_enrichment_celltype=CL:0000738!2.30e-38!140;CL:0002087!3.92e-35!119;CL:0002031!1.87e-31!124;CL:0000037!1.26e-27!172;CL:0000566!1.26e-27!172;CL:0002057!3.37e-27!42;CL:0002032!1.60e-26!165;CL:0000837!1.60e-26!165;CL:0002009!9.20e-26!65;CL:0000988!1.02e-25!182;CL:0000766!3.24e-25!76;CL:0002194!6.46e-25!63;CL:0000576!6.46e-25!63;CL:0000040!6.46e-25!63;CL:0000559!6.46e-25!63;CL:0000860!1.37e-23!45;CL:0000557!4.15e-22!71;CL:0000839!1.54e-20!70;CL:0000763!9.08e-16!112;CL:0000049!9.08e-16!112;CL:0000134!3.90e-12!358;CL:0002320!3.15e-11!365;CL:0000542!2.11e-10!53;CL:0000051!2.11e-10!53;CL:0000838!3.21e-10!52;CL:0000791!1.20e-09!18;CL:0000789!1.20e-09!18;CL:0002420!1.20e-09!18;CL:0002419!1.20e-09!18;CL:0000790!1.20e-09!18;CL:0000219!1.07e-07!390;CL:0000048!1.68e-07!430;CL:0000084!1.79e-07!25;CL:0000827!1.79e-07!25;CL:0000723!4.33e-07!436;CL:0000034!5.11e-07!444;CL:0000625!6.13e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.44e-33;33!CL:0002057;3.44e-33;33!CL:0000473;3.59e-28;39!CL:0000234;3.59e-28;39!CL:0000576;1.54e-23;48!CL:0000766;1.20e-17;69!CL:0002087;1.92e-15;104!CL:0000791;4.26e-15;18!CL:0000789;4.26e-15;18!CL:0002419;4.26e-15;18!CL:0000738;8.07e-13;136!CL:0000084;9.03e-12;25!CL:0000625;2.17e-10;11!CL:0000542;7.41e-09;53!CL:0000988;2.71e-08;177!CL:0000219;7.71e-08;193!CL:0000763;1.61e-07;100!CL:0002393;5.34e-07;6!CL:0002397;5.34e-07;6!CL:0000094;9.97e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.08e-56,136;CL:0002087,8.95e-51,115;CL:0002031,6.44e-49,120;CL:0000473,1.18e-44,48;CL:0000234,1.18e-44,48;CL:0000860,6.81e-44,42;CL:0002057,6.81e-44,42;CL:0000037,1.76e-42,168;CL:0002032,3.21e-42,161;CL:0000837,3.21e-42,161;CL:0000988,2.21e-40,177;CL:0002009,2.55e-39,61;CL:0000766,3.21e-39,72;CL:0002194,6.28e-38,59;CL:0000576,6.28e-38,59;CL:0000040,6.28e-38,59;CL:0000559,6.28e-38,59;CL:0000557,4.45e-34,67;CL:0000839,6.05e-32,66;CL:0000763,6.38e-26,108;CL:0000049,6.38e-26,108;CL:0000134,6.66e-18,354;CL:0002320,7.52e-17,361;CL:0000838,4.00e-15,52;CL:0000791,7.10e-15,18;CL:0000789,7.10e-15,18;CL:0002420,7.10e-15,18;CL:0002419,7.10e-15,18;CL:0000790,7.10e-15,18;CL:0000542,1.25e-14,53;CL:0000051,1.25e-14,53;CL:0000219,1.24e-13,386;CL:0000084,1.14e-11,25;CL:0000827,1.14e-11,25;CL:0000048,2.02e-11,427;CL:0000034,8.21e-11,441;CL:0000723,8.68e-11,433;CL:0000625,1.98e-10,11;CL:0002393,7.86e-09,9;CL:0002397,7.86e-09,9;CL:0000094,6.68e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.20e-31;42!CL:0000790;4.26e-15;18!CL:0000051;7.41e-09;53!CL:0000049;1.84e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.84e-25!102;UBERON:0003061!2.84e-25!102;UBERON:0002193!2.25e-22!112;UBERON:0002371!1.53e-18!80;UBERON:0001474!7.83e-17!86;UBERON:0002405!3.87e-14!115;UBERON:0004765!6.97e-14!101;UBERON:0001434!6.97e-14!101;UBERON:0002384!3.39e-11!375;UBERON:0003081!1.66e-08!216;UBERON:0002204!3.18e-07!167;UBERON:0000178!8.39e-07!15;UBERON:0000179!8.39e-07!15;UBERON:0000463!8.39e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.61e-07;15!UBERON:0000179;2.61e-07;15!UBERON:0000463;2.61e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.40e-35,98;UBERON:0003061,5.40e-35,98;UBERON:0002193,1.42e-29,108;UBERON:0002371,2.10e-29,76;UBERON:0001474,7.16e-26,82;UBERON:0002405,2.37e-23,93;UBERON:0004765,6.20e-22,90;UBERON:0001434,7.10e-19,100;UBERON:0002384,1.74e-16,371;UBERON:0003081,5.09e-14,203;UBERON:0002204,1.57e-08,167;UBERON:0000178,2.91e-07,15;UBERON:0000179,2.91e-07,15;UBERON:0000463,2.91e-07,15 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,2.53299878168311,0.631719873426831,0,0.245733936501509,0.697801167972428,0,0,0,0.331397375727916,1.34465029290355,0,0,0.487932798790507,0,0,0.313454721478088,0,0.136874425072884,0.251085279189606,0.458480434487708,0.164201178899891,0,0,1.53531759238885,1.70297735647684,0,0,0.369754010166788,0.309868802321207,0,0.293600439334847,3.32397245119126,8.22232234627581,7.16135873362311,0.895661896959697,1.6194683300949,0.257575567634187,3.19876125315042,10.9584023669755,11.6440349370152,3.71886459049095,17.2690512969167,6.50383378879718,5.46615545412086,19.2120529896825,5.91205574721463,3.7922024881028,12.9096936716765,6.77132432971709,4.51781614902251,10.9162460023138,4.04502272001152,6.42776173978895,9.9487998393589,9.59005688698562,5.27762080298746,13.7629923758926,10.2293940127847,6.09439401120026,18.7237124148076,19.3074897188628,6.53246529667532,10.429658368404,9.99068685643537,7.26479403160043,8.10210799172642,7.27863491114034,2.11255286311942,4.46469029926591,2.30624510059213,2.80821577866238,3.45406853535464,1.28580469357664,3.42015292489498,2.38700012638908,1.27864907635244,0,2.73069305631066,1.77901850772711,3.41384178053206,4.40435585739614,4.02326707968138,1.98313461835459,0,3.41527781465669,1.17447437874188,4.20500550937752,2.64342657158052,1.68152568894461,0.790152254325231,1.180258620683,10.2182798314783,5.96244347098577,1.5046784585161,1.30368906653436,2.36723902867367,1.94826728407911,1.6711568532776,2.06224135232386,2.87994062958707,1.08321545506006,2.94610035369053,3.12142434143708,2.63100647365882,1.38175008892924,1.15921234294021,2.96573126324121,2.40786745280742,1.04535523804977,1.35971211237079,1.53288197440768,5.49803912772208,2.27717722817553,3.50421955756506,1.95325036156926,3.8018081777935,2.40920190524436,3.58362511232371,1.24930726552346,2.13099526839615,4.10563998460523,2.21767417547206,11.4999284186908,8.54463982908514,0,0,0,0,0,0.144846518960824,0,1.94653948121054,0,0.221729397462564,0,0.589405839739707,0,0,1.29818957461873,1.91542711029194,1.32957960518865,0.953962497221368,5.71994910780128,2.22874500797739,0,0,0,0,0,0,0,0.516833518338658,0,0,0.805658634218294,0,0,0,0,0.0892997282840798,0,0,0,0,0,5.27121669744253,19.3890132074163,0,2.48485975847659,0.25326102332916,0.264818361626438,1.72101972449288,0.354668382198357,0,0,0.74000264525148,0.311211035399766,0.269421344139376,0.490385709340376,0.454072282934794,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,3.70900393917835,0,0,0,0,0.277064115484183,0,0.919463387397059,2.25357088359895,0,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,0.323292113637624,0.355009592516614,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,4.5026865673502,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0.269662616320329,0,0,1.4763109092493,0,0,0,0,3.9313088667105,0,0,0.245976877086227,0,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0.721832238805369,0,0.951270761172991,0,0,0.492434012174795,0.936017060556951,1.18904929830983,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,1.17217447210047,0,0.205654985406647,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0.871533458600294,0.099972991182057,6.08118903205952,4.01805673145701,6.32501818449095,0,0,0,0.144781306667579,0,0.179060963239896,1.12085143993527,1.77327684181734,12.075144192133,6.41715181398742,0.254094624222463,0,0,0,0.637938751653163,6.74106321552464,26.9245313283622,4.97298616123243,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0.473107245101804,0.35142424497814,0,6.82222512167955,0,0,0,0.60818530127658,0,0,0.413536052245775,1.2942852049117,0.640365346820666,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,1.48418066444991,0.462629081407967,0.710246901252508,0,2.07701771673448,0,0,0.200506470303285,0,0.229628896329213,0,1.83574180943194,0,0.15403067420883,0,0,0.211103257785751,1.13733384070897,0.510281115829547,0.215915916102139,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.183138929636687,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0,0,0,0,0,0.170453254832202,0.0890320356467374,0,0,0,0.10115778085555,0,0.62962469366128,0,1.84820148105653,0,0,0,0.286249773483982,0,0,0.571890581771475,0,0,0.318203247925937,0.78494864019923,0.179872457583315,0,0,0.202182481573316,0,0,0,4.6305563029944,0,0.409499734223957,0.141405431953713,0,0,0.66343897524122,1.75380354101505,0,0,0.202910376962704,0.30982349809975,2.25356482025793,0,0.0982490410131212,1.07001315444375,0,0.422215270595328,0.329294892959902,0,0,0.0962221127255121,0,0,0.282431402330337,0.43050537267123,0,0,0,2.02979043692868,1.52927441428475,11.9625909306574,1.42939065274673,2.87953591160336,1.94541993357815,2.70015718619057,11.1037524681198,0.106824071127473,0,0,0.743212700502875,0,0,0,0,0.191505370132367,0,0,0.561594356226918,0,0.78339947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| ||
|short_description=p10@HLA-B | |||
}} | }} |
Latest revision as of 20:21, 17 September 2015
Short description: | p10@HLA-B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_HLA-B_5end |
Coexpression cluster: | C500_Neutrophils_Monocytederived_blood_CD14_Eosinophils_lung_mixed |
Association with transcript: | 17bp_to_ENST00000474381_5end |
EntrezGene: | HLA-B |
HGNC: | 4932 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.40e-35 | 98 |
blood island | 5.40e-35 | 98 |
hemolymphoid system | 1.42e-29 | 108 |
bone marrow | 2.10e-29 | 76 |
bone element | 7.16e-26 | 82 |
immune system | 2.37e-23 | 93 |
skeletal element | 6.20e-22 | 90 |
skeletal system | 7.10e-19 | 100 |
connective tissue | 1.74e-16 | 371 |
lateral plate mesoderm | 5.09e-14 | 203 |
musculoskeletal system | 1.57e-08 | 167 |
blood | 2.91e-07 | 15 |
haemolymphatic fluid | 2.91e-07 | 15 |
organism substance | 2.91e-07 | 15 |