FFCP PHASE1:Hg19::chr4:42154262..42154274,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389206 | |EntrezGene=389206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=23815 | |HGNC=23815 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWN6 | |UniProt=F5GWN6 | ||
|association_with_transcript=-114bp_to_ENST00000411720_5end | |association_with_transcript=-114bp_to_ENST00000411720_5end | ||
|cluster_id=chr4:42154262..42154274,- | |||
|coexpression_cluster_id=C4414 | |coexpression_cluster_id=C4414 | ||
|description=CAGE_peak_9_at_BEND4_5end | |description=CAGE_peak_9_at_BEND4_5end | ||
|id=chr4:42154262..42154274,- | |id=chr4:42154262..42154274,- | ||
|ontology_enrichment_celltype=CL:0002322!3.66e-09!5 | |ontology_enrichment_celltype=CL:0002322!3.66e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000333;2.78e-08;5!CL:0000236;7.48e-07;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!4.84e-08!51;DOID:0060083!4.84e-08!51;DOID:8692!6.29e-08!31;DOID:1240!6.69e-08!39 | |ontology_enrichment_disease=DOID:2531!4.84e-08!51;DOID:0060083!4.84e-08!51;DOID:8692!6.29e-08!31;DOID:1240!6.69e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.52e-07;31!DOID:169;4.87e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.65e-07,31;DOID:169,4.00e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000956!9.06e-19!25;UBERON:0000203!9.06e-19!25;UBERON:0001869!2.85e-17!32;UBERON:0002619!3.71e-17!22;UBERON:0001950!1.14e-16!20;UBERON:0002020!4.41e-16!34;UBERON:0003528!4.41e-16!34;UBERON:0001893!5.82e-16!34;UBERON:0002791!7.43e-15!33;UBERON:0002780!7.96e-14!41;UBERON:0001890!7.96e-14!41;UBERON:0006240!7.96e-14!41;UBERON:0003080!2.27e-13!42;UBERON:0000073!1.14e-11!94;UBERON:0001016!1.14e-11!94;UBERON:0001049!1.53e-10!57;UBERON:0005068!1.53e-10!57;UBERON:0006241!1.53e-10!57;UBERON:0007135!1.53e-10!57;UBERON:0005743!1.61e-10!86;UBERON:0001017!1.63e-10!82;UBERON:0000955!2.36e-10!69;UBERON:0006238!2.36e-10!69;UBERON:0002616!5.42e-10!59;UBERON:0003056!2.14e-09!61;UBERON:0007023!7.66e-09!115;UBERON:0000473!3.63e-08!8;UBERON:0001871!6.51e-08!7;UBERON:0000200!1.80e-07!6;UBERON:0003075!3.26e-07!86;UBERON:0007284!3.26e-07!86 | |ontology_enrichment_uberon=UBERON:0000956!9.06e-19!25;UBERON:0000203!9.06e-19!25;UBERON:0001869!2.85e-17!32;UBERON:0002619!3.71e-17!22;UBERON:0001950!1.14e-16!20;UBERON:0002020!4.41e-16!34;UBERON:0003528!4.41e-16!34;UBERON:0001893!5.82e-16!34;UBERON:0002791!7.43e-15!33;UBERON:0002780!7.96e-14!41;UBERON:0001890!7.96e-14!41;UBERON:0006240!7.96e-14!41;UBERON:0003080!2.27e-13!42;UBERON:0000073!1.14e-11!94;UBERON:0001016!1.14e-11!94;UBERON:0001049!1.53e-10!57;UBERON:0005068!1.53e-10!57;UBERON:0006241!1.53e-10!57;UBERON:0007135!1.53e-10!57;UBERON:0005743!1.61e-10!86;UBERON:0001017!1.63e-10!82;UBERON:0000955!2.36e-10!69;UBERON:0006238!2.36e-10!69;UBERON:0002616!5.42e-10!59;UBERON:0003056!2.14e-09!61;UBERON:0007023!7.66e-09!115;UBERON:0000473!3.63e-08!8;UBERON:0001871!6.51e-08!7;UBERON:0000200!1.80e-07!6;UBERON:0003075!3.26e-07!86;UBERON:0007284!3.26e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000996;2.50e-10;1!UBERON:0000013;2.78e-08;5!UBERON:0002410;2.78e-08;5!UBERON:0001950;4.84e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,1.30e-10,1;UBERON:0000013,2.19e-08,5;UBERON:0002410,2.19e-08,5;UBERON:0001950,5.89e-07,20 | |||
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| ||
|short_description=p9@BEND4 | |short_description=p9@BEND4 | ||
}} | }} |
Latest revision as of 20:10, 17 September 2015
Short description: | p9@BEND4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_BEND4_5end |
Coexpression cluster: | C4414_chronic_smallcell_neuroblastoma_testis_iPS_testicular_acute |
Association with transcript: | -114bp_to_ENST00000411720_5end |
EntrezGene: | BEND4 |
HGNC: | 23815 |
UniProt: | F5GWN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vagina | 1.30e-10 | 1 |
sympathetic nervous system | 2.19e-08 | 5 |
autonomic nervous system | 2.19e-08 | 5 |
neocortex | 5.89e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.65e-07 | 31 |
neuroendocrine tumor | 4.00e-07 | 6 |