FFCP PHASE1:Hg19::chr17:7590797..7590815,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:7590797..7590815,- to FFCP PHASE1:Hg19::chr17:7590797..7590815,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7157 | |EntrezGene=7157 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11998 | |HGNC=11998 | ||
|TSSclassifier=strong | |||
|UniProt=E7ERV1,P04637,E7ESS1 | |UniProt=E7ERV1,P04637,E7ESS1 | ||
|association_with_transcript=0bp_to_ENST00000414315,ENST00000420246,ENST00000445888,ENST00000455263,ENST00000505014,ENST00000509690_5end | |||
|cluster_id=chr17:7590797..7590815,- | |||
|description=CAGE_peak_1_at_TP53_5end | |||
|id=chr17:7590797..7590815,- | |||
|ontology_enrichment_celltype=CL:0000066!8.62e-16!254;CL:0002321!6.01e-15!248;CL:0000220!2.45e-14!246;CL:0000548!1.01e-12!679;CL:0000004!1.01e-12!679;CL:0000255!1.01e-12!679;CL:0000012!1.66e-12!682;CL:0000076!1.60e-10!62;CL:0000213!4.05e-10!57;CL:0000215!4.05e-10!57;CL:0002139!5.57e-10!24;CL:0000115!2.98e-09!35;CL:0000071!8.33e-09!18;CL:0002546!8.33e-09!18;CL:0000221!1.91e-08!71;CL:0000222!2.93e-08!119;CL:0002078!6.16e-08!44;CL:0000133!1.03e-07!59;CL:0000003!4.89e-07!722;CL:0002319!6.16e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.50e-10;24!CL:0000071;8.05e-09;18!CL:0000115;1.90e-07;36!CL:0002319;6.86e-07;25!CL:0000213;9.61e-07;58!CL:0000215;9.61e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.18e-15,253;CL:0002321,6.73e-15,250;CL:0000076,2.96e-10,63;CL:0002139,5.57e-10,24;CL:0000213,9.10e-10,58;CL:0000215,9.10e-10,58;CL:0000071,8.33e-09,18;CL:0002546,8.33e-09,18;CL:0000115,8.50e-09,36;CL:0000221,3.01e-08,72;CL:0000222,3.52e-08,121;CL:0000133,1.03e-07,59;CL:0002078,1.36e-07,45;CL:0002319,6.16e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002546;8.05e-09;18 | |||
|ontology_enrichment_disease=DOID:14566!5.62e-09!239;DOID:162!1.23e-08!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,5.62e-09,239;DOID:162,1.23e-08,235 | |||
|ontology_enrichment_uberon=UBERON:0001986!8.33e-09!18;UBERON:0004638!8.33e-09!18;UBERON:0004852!8.33e-09!18;UBERON:0000487!7.74e-08!22;UBERON:0000055!1.48e-07!69;UBERON:0002049!2.41e-07!79;UBERON:0007798!2.41e-07!79;UBERON:0006914!4.10e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.05e-09;18!UBERON:0001986;8.05e-09;18!UBERON:0004852;8.05e-09;18!UBERON:0000487;7.77e-08;22!UBERON:0006914;4.08e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.33e-09,18;UBERON:0001986,8.33e-09,18;UBERON:0004852,8.33e-09,18;UBERON:0000055,7.72e-08,68;UBERON:0000487,7.74e-08,22;UBERON:0002049,1.34e-07,78;UBERON:0007798,1.34e-07,78;UBERON:0006914,4.10e-07,25 | |||
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 | ||
|short_description=p1@TP53 | |||
}} | }} |
Latest revision as of 20:04, 17 September 2015
Short description: | p1@TP53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TP53_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000414315, ENST00000420246, ENST00000445888, ENST00000455263, ENST00000505014, ENST00000509690_5end |
EntrezGene: | TP53 |
HGNC: | 11998 |
UniProt: | E7ERV1P04637E7ESS1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.18e-15 | 253 |
embryonic cell | 6.73e-15 | 250 |
squamous epithelial cell | 2.96e-10 | 63 |
endothelial cell of vascular tree | 5.57e-10 | 24 |
lining cell | 9.10e-10 | 58 |
barrier cell | 9.10e-10 | 58 |
blood vessel endothelial cell | 8.33e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.33e-09 | 18 |
endothelial cell | 8.50e-09 | 36 |
ectodermal cell | 3.01e-08 | 72 |
mesodermal cell | 3.52e-08 | 121 |
neurectodermal cell | 1.03e-07 | 59 |
meso-epithelial cell | 1.36e-07 | 45 |
neural cell | 6.16e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 8.33e-09 | 18 |
endothelium | 8.33e-09 | 18 |
cardiovascular system endothelium | 8.33e-09 | 18 |
vessel | 7.72e-08 | 68 |
simple squamous epithelium | 7.74e-08 | 22 |
vasculature | 1.34e-07 | 78 |
vascular system | 1.34e-07 | 78 |
squamous epithelium | 4.10e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.62e-09 | 239 |
cancer | 1.23e-08 | 235 |