FFCP PHASE1:Hg19::chr13:53173859..53173865,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144983 | |EntrezGene=144983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=27067 | |HGNC=27067 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=109bp_to_AK123081_5end | |association_with_transcript=109bp_to_AK123081_5end | ||
|cluster_id=chr13:53173859..53173865,+ | |||
|description=CAGE_peak_3_at_HNRNPA1L2_5end | |description=CAGE_peak_3_at_HNRNPA1L2_5end | ||
|id=chr13:53173859..53173865,+ | |id=chr13:53173859..53173865,+ | ||
|ontology_enrichment_celltype=CL:0002543;4.26e-15;6!CL:0002618;1.10e-08;3!CL:0000333;1.45e-08;5 | |ontology_enrichment_celltype=CL:0002139!4.87e-08!24;CL:0000071!5.85e-08!18;CL:0002546!5.85e-08!18 | ||
| | |ontology_enrichment_celltype_v019=CL:0002543;4.26e-15;6!CL:0002618;1.10e-08;3!CL:0000333;1.45e-08;5 | ||
|ontology_enrichment_disease=DOID:169;4.12e-07;6 | |ontology_enrichment_celltype_v019_2=CL:0002543,2.87e-15,6;CL:0002618,1.34e-08,3 | ||
|ontology_enrichment_uberon=UBERON:0001638;7.03e-13;9!UBERON:0003920;7.03e-13;9!UBERON:0004582;7.03e-13;9!UBERON:0000013;1.45e-08;5!UBERON:0002410;1.45e-08;5!UBERON:0002240;4.21e-08;3!UBERON:0005174;4.21e-08;3!UBERON:0001137;4.21e-08;3!UBERON:0000489;3.80e-07;29 | |ontology_enrichment_development_v019=UBERON:0006241;4.21e-08;3!UBERON:0003057;4.21e-08;3 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;4.12e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.70e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000468!8.36e-09!659;UBERON:0001981!1.66e-08!60;UBERON:0007500!1.66e-08!60;UBERON:0004537!1.66e-08!60;UBERON:0006965!1.66e-08!60;UBERON:0000055!2.12e-08!69;UBERON:0001986!5.85e-08!18;UBERON:0004638!5.85e-08!18;UBERON:0004852!5.85e-08!18;UBERON:0000477!8.52e-08!286;UBERON:0006914!2.27e-07!25;UBERON:0001638!3.03e-07!9;UBERON:0003920!3.03e-07!9;UBERON:0004582!3.03e-07!9;UBERON:0000483!5.10e-07!309;UBERON:0002049!7.29e-07!79;UBERON:0007798!7.29e-07!79;UBERON:0004111!8.39e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001638;7.03e-13;9!UBERON:0003920;7.03e-13;9!UBERON:0004582;7.03e-13;9!UBERON:0000013;1.45e-08;5!UBERON:0002410;1.45e-08;5!UBERON:0002240;4.21e-08;3!UBERON:0005174;4.21e-08;3!UBERON:0001137;4.21e-08;3!UBERON:0000489;3.80e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001638,5.79e-13,9;UBERON:0003920,5.79e-13,9;UBERON:0004582,5.79e-13,9;UBERON:0000013,8.64e-09,5;UBERON:0002410,8.64e-09,5;UBERON:0002240,4.09e-08,3;UBERON:0005174,4.09e-08,3;UBERON:0001137,4.09e-08,3;UBERON:0000489,7.40e-08,31 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.704772020479856,0,0,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0,0,0.313454721478088,0.286235987131057,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,1.44575660953827,1.50401373190767,0.289693037921647,1.5905718941022,0.486634870302636,0,0.221729397462564,0.527008714158756,0.458426764241994,0,0,0,0,0,0,0,0,0.596287222100115,1.72046919021225,0.347140501607594,0.56530794192401,0.838998872419812,0.825354125820202,0.626984899610432,0.516833518338658,0,0.33472061276467,0,0.760272105718513,0.488124115096339,0.735326160691737,0,3.12549048994279,4.26605807989723,2.25222960966644,3.06633274931766,1.89853131913626,2.38162267109529,0,0,0,0.496971951695318,0.12663051166458,1.05927344650575,2.29469296599051,1.06400514659507,0,0,0,0,0.404132016209064,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0.323745888736263,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,1.07633781413317,0.427114777637135,0,1.80054657650641,0.824420233907511,0.515281080091258,0,1.35021065793013,0.779496041289589,2.77677151668526,0.460249493211497,0.323292113637624,2.84007674013291,0.503760491138201,0.169560592310488,0,0.272746120590835,0.286804595389004,0.121973706129595,0.265059536642971,0.232387885739037,0,0,0,0,0,0,0,0,0.709840800239063,0.842923450390509,1.44606617930089,0.55146986366197,0.871517776369625,1.18635309555548,0.943819157121151,0.196221465125346,1.53898862778556,0.738155454624648,1.40241773803446,0,1.47008711385542,0,0,0,0,0.983907508344908,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.587043471179108,0.866198686566443,0,1.90254152234598,0.790204397959275,0,0,0,0,0.93733833986777,0.839910640994298,0.141775097242386,1.70161193135412,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.821905290201534,0,0,0,0,0,0.76228387266739,1.30139853857622,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0,0.992431231275107,1.99500565274481,1.12264037773229,0.640695746278505,0,0.321707842287215,0,0.154209693802656,0.355123450626254,0.410635780069046,0.519254429183621,0.581051892299796,2.41718899183244,0.601519410909855,0.184161977871793,0.229628896329213,0,0.524497659837696,0,0.15403067420883,0,1.46139224653261,0,0,0.170093705276516,0.647747748306418,1.54227252690289,0.541892875087706,1.50506932156456,0,0,0.671624264166535,0,0,0.256450125116389,0.656029291399411,0.650756789328606,0,0,0,0,0,0,0.290012154876366,0.462145851343933,0,0.137836572484531,0.214840489736547,0,0.0852266274161009,0.267096106940212,0.165284915360978,0.192190067365106,0.638063562472921,0.10115778085555,1.39453664789186,0.94443704049192,0.6970372701606,0,0.532306030317022,0,0.18532421910392,0.572499546967965,0.372158369359667,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.589062011728432,0.202182481573316,0,0,0,0,0,0.136499911407986,0.424216295861138,1.13008116620243,1.10273068709225,0,0,0,0,0,0.6196469961995,0.563391205064483,0.430234056612155,0.589494246078727,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,1.06824071127473,0,0.245040215981032,0,0,0.782560276832555,0,0.798317485731266,0.383010740264733,0,0,0,0,0,0,0,0,0,2.55507742614196,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0.852408440419239,0,0,0,0,0,0,0,2.95575571379191,0.597743964753209,1.38141957765574,4.53478946137697,1.02268682502155,0,0,0.0898683511473268,0,0,1.08507746200627,0,1.11136990144637,0.969332746095218,0,0,0,0,0,0.341380344856499,0,0,0.344743373241465,0,2.2571249341328,0,0,3.05163472634166,0,0.295547618953547,0.438770794307945,1.19832309870889,0.41827123283581,1.46205491157214,0,0,0,0.217294743844016,0,0.274792780205587,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0.141353071433941,3.89499551535764,0.995261931078505,0.884575645033392,0,0,0,0,0.337005664903385,1.60515529459758,0.234264445725339,0,0.391329237864179,0.242780379534093,1.57833761139756,0,0,0.31593289814244,1.50323419414493,1.86638744515045,0,0,0,1.19472429772959,0,0,0.173559738335131,0.0979923974143777,0.435296032902013,1.04836000945218,0.859930162358083,2.22539561964896,2.77739404927505,1.31384731285135,0.0969890164884194,0,0.225980740780532,0,0.19871461170299,0.189932387867636,0.391102765469606,0,0.640358984218058,0,0.432271251462318,0,0.514784993585894,0.576219191952599,0.124252535565433,0.942776138467182,0.543616824294456,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,1.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| ||
|short_description=p3@HNRNPA1L2 | |short_description=p3@HNRNPA1L2 | ||
}} | }} |
Latest revision as of 19:39, 17 September 2015
Short description: | p3@HNRNPA1L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HNRNPA1L2_5end |
Coexpression cluster: | NA |
Association with transcript: | 109bp_to_AK123081_5end |
EntrezGene: | HNRNPA1L2 |
HGNC: | 27067 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 2.87e-15 | 6 |
endothelial cell of umbilical vein | 1.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
vein | 5.79e-13 | 9 |
venous blood vessel | 5.79e-13 | 9 |
venous system | 5.79e-13 | 9 |
sympathetic nervous system | 8.64e-09 | 5 |
autonomic nervous system | 8.64e-09 | 5 |
spinal cord | 4.09e-08 | 3 |
dorsal region element | 4.09e-08 | 3 |
dorsum | 4.09e-08 | 3 |
cavitated compound organ | 7.40e-08 | 31 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.70e-07 | 6 |