FFCP PHASE1:Hg19::chr10:28287942..28287952,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=55130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=25583 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q5T2S8,A8K906 | ||
|association_with_transcript=24bp_to_ENST00000305242,NM_018076,uc001itz.2_5end | |association_with_transcript=24bp_to_ENST00000305242,NM_018076,uc001itz.2_5end | ||
|cluster_id=chr10:28287942..28287952,- | |cluster_id=chr10:28287942..28287952,- |
Latest revision as of 19:37, 17 September 2015
Short description: | p8@ARMC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ARMC4_5end |
Coexpression cluster: | C199_glioblastoma_B_osteosarcoma_Fibroblast_heart_rhabdomyosarcoma_myxofibrosarcoma |
Association with transcript: | 24bp_to_ENST00000305242, NM_018076, uc001itz.2_5end |
EntrezGene: | ARMC4 |
HGNC: | 25583 |
UniProt: | Q5T2S8A8K906 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p8@ARMC4 |
---|
0
1
2
3
4
5
6
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.09e-17 | 25 |
glial cell (sensu Vertebrata) | 9.17e-13 | 15 |
glial cell | 9.17e-13 | 15 |
glioblast | 9.17e-13 | 15 |
glioblast (sensu Vertebrata) | 9.17e-13 | 15 |
neuron associated cell | 1.55e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.55e-11 | 17 |
fibroblast of gingiva | 3.60e-11 | 5 |
neurectodermal cell | 3.25e-08 | 59 |
neuronal stem cell | 1.69e-07 | 8 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.33e-17 | 11 |
Showing 1 to 1 of 1 entries