FFCP PHASE2:Hg19::chr10:28035133..28035148,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:283078 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:23729 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=283078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=23729 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8IYA7 | ||
|association_with_transcript=-144bp_to_ENST00000375790_5end | |association_with_transcript=-144bp_to_ENST00000375790_5end | ||
|cluster_id=chr10:28035133..28035148,- | |cluster_id=chr10:28035133..28035148,- |
Latest revision as of 19:28, 17 September 2015
Short description: | p3@MKX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MKX_5end |
Coexpression cluster: | C2053_Fibroblast_tridermal_tenocyte_transitionalcell_normal_Pancreatic_Synoviocyte |
Association with transcript: | -144bp_to_ENST00000375790_5end |
EntrezGene: | MKX |
HGNC: | 23729 |
UniProt: | Q8IYA7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@MKX |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.55e-16 | 76 |
fibroblast of gingiva | 2.32e-12 | 5 |
skin fibroblast | 1.25e-11 | 23 |
fibroblast of periodontium | 3.04e-10 | 6 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
---|---|---|
surface structure | 2.59e-15 | 99 |
periodontium | 3.04e-10 | 6 |
dentition | 3.04e-10 | 6 |
mouth | 7.05e-09 | 29 |
stomodeum | 7.05e-09 | 29 |
skull | 8.79e-09 | 7 |
cranial skeletal system | 2.43e-08 | 11 |
pituitary gland | 3.50e-08 | 2 |
orifice | 4.30e-08 | 36 |
gingiva | 9.90e-08 | 8 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.01e-11 | 5 |
myotonic disease | 1.01e-11 | 5 |
muscle tissue disease | 1.01e-11 | 5 |
myopathy | 1.01e-11 | 5 |
muscular disease | 1.01e-11 | 5 |
myotonic dystrophy | 1.01e-11 | 5 |
teratoma | 4.04e-08 | 2 |
Showing 1 to 7 of 7 entries