FFCP PHASE1:Hg19::chr11:35211511..35211550,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=960 | |EntrezGene=960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1681 | |HGNC=1681 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000524922_5end | |association_with_transcript=-6bp_to_ENST00000524922_5end | ||
|cluster_id=chr11:35211511..35211550,+ | |||
|coexpression_cluster_id=C620 | |coexpression_cluster_id=C620 | ||
|description=CAGE_peak_5_at_CD44_5end | |description=CAGE_peak_5_at_CD44_5end | ||
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|ontology_enrichment_celltype=CL:0002057!7.50e-18!42;CL:0000557!2.16e-17!71;CL:0002009!2.53e-16!65;CL:0000860!2.65e-16!45;CL:0000839!3.46e-16!70;CL:0000766!4.42e-16!76;CL:0002194!5.64e-16!63;CL:0000576!5.64e-16!63;CL:0000040!5.64e-16!63;CL:0000559!5.64e-16!63;CL:0002371!8.13e-13!591;CL:0000144!2.26e-11!625;CL:0000003!5.26e-11!722;CL:0000012!4.06e-10!682;CL:0000548!4.71e-10!679;CL:0000004!4.71e-10!679;CL:0000255!4.71e-10!679;CL:0002031!1.21e-08!124;CL:0002087!4.41e-08!119;CL:0000738!6.85e-08!140;CL:0000723!1.62e-07!436;CL:0000063!2.86e-07!578;CL:0000048!4.57e-07!430 | |ontology_enrichment_celltype=CL:0002057!7.50e-18!42;CL:0000557!2.16e-17!71;CL:0002009!2.53e-16!65;CL:0000860!2.65e-16!45;CL:0000839!3.46e-16!70;CL:0000766!4.42e-16!76;CL:0002194!5.64e-16!63;CL:0000576!5.64e-16!63;CL:0000040!5.64e-16!63;CL:0000559!5.64e-16!63;CL:0002371!8.13e-13!591;CL:0000144!2.26e-11!625;CL:0000003!5.26e-11!722;CL:0000012!4.06e-10!682;CL:0000548!4.71e-10!679;CL:0000004!4.71e-10!679;CL:0000255!4.71e-10!679;CL:0002031!1.21e-08!124;CL:0002087!4.41e-08!119;CL:0000738!6.85e-08!140;CL:0000723!1.62e-07!436;CL:0000063!2.86e-07!578;CL:0000048!4.57e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.25e-19;33!CL:0002057;6.25e-19;33!CL:0000473;2.32e-17;39!CL:0000234;2.32e-17;39!CL:0000576;2.38e-10;48!CL:0000766;1.78e-09;69 | |ontology_enrichment_celltype_v019=CL:0000860;6.25e-19;33!CL:0002057;6.25e-19;33!CL:0000473;2.32e-17;39!CL:0000234;2.32e-17;39!CL:0000576;2.38e-10;48!CL:0000766;1.78e-09;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.35e-20,48;CL:0000234,2.35e-20,48;CL:0000557,3.74e-19,67;CL:0000860,1.62e-18,42;CL:0002057,1.62e-18,42;CL:0000839,5.06e-18,66;CL:0002009,7.44e-18,61;CL:0000766,8.08e-18,72;CL:0002194,1.69e-17,59;CL:0000576,1.69e-17,59;CL:0000040,1.69e-17,59;CL:0000559,1.69e-17,59;CL:0002031,6.07e-09,120;CL:0000723,1.83e-08,433;CL:0002087,3.70e-08,115;CL:0000738,4.03e-08,136;CL:0000048,6.81e-08,427;CL:0000034,1.48e-07,441;CL:0000763,7.35e-07,108;CL:0000049,7.35e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.99e-14;42 | |ontology_enrichment_development_v019=CL:0002057;2.99e-14;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.94e-16!167;UBERON:0002371!7.92e-16!80;UBERON:0004765!6.07e-13!101;UBERON:0001434!6.07e-13!101;UBERON:0001474!8.81e-13!86;UBERON:0002390!1.84e-12!102;UBERON:0003061!1.84e-12!102;UBERON:0002193!3.80e-10!112;UBERON:0003102!1.52e-07!95 | |ontology_enrichment_uberon=UBERON:0002204!4.94e-16!167;UBERON:0002371!7.92e-16!80;UBERON:0004765!6.07e-13!101;UBERON:0001434!6.07e-13!101;UBERON:0001474!8.81e-13!86;UBERON:0002390!1.84e-12!102;UBERON:0003061!1.84e-12!102;UBERON:0002193!3.80e-10!112;UBERON:0003102!1.52e-07!95 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.33e-17,76;UBERON:0002204,1.70e-16,167;UBERON:0004765,9.40e-15,90;UBERON:0001474,2.93e-14,82;UBERON:0001434,1.87e-13,100;UBERON:0002390,2.78e-12,98;UBERON:0003061,2.78e-12,98;UBERON:0002405,4.86e-11,93;UBERON:0002193,6.64e-10,108;UBERON:0003102,5.35e-08,99 | |||
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| ||
|short_description=p5@CD44 | |short_description=p5@CD44 | ||
}} | }} |
Latest revision as of 19:21, 17 September 2015
Short description: | p5@CD44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CD44_5end |
Coexpression cluster: | C620_CD14_Smooth_Fibroblast_Mast_signet_normal_meningioma |
Association with transcript: | -6bp_to_ENST00000524922_5end |
EntrezGene: | CD44 |
HGNC: | 1681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.35e-20 | 48 |
phagocyte | 2.35e-20 | 48 |
granulocyte monocyte progenitor cell | 3.74e-19 | 67 |
classical monocyte | 1.62e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.62e-18 | 42 |
myeloid lineage restricted progenitor cell | 5.06e-18 | 66 |
macrophage dendritic cell progenitor | 7.44e-18 | 61 |
myeloid leukocyte | 8.08e-18 | 72 |
monopoietic cell | 1.69e-17 | 59 |
monocyte | 1.69e-17 | 59 |
monoblast | 1.69e-17 | 59 |
promonocyte | 1.69e-17 | 59 |
hematopoietic lineage restricted progenitor cell | 6.07e-09 | 120 |
somatic stem cell | 1.83e-08 | 433 |
nongranular leukocyte | 3.70e-08 | 115 |
leukocyte | 4.03e-08 | 136 |
multi fate stem cell | 6.81e-08 | 427 |
stem cell | 1.48e-07 | 441 |
myeloid cell | 7.35e-07 | 108 |
common myeloid progenitor | 7.35e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.33e-17 | 76 |
musculoskeletal system | 1.70e-16 | 167 |
skeletal element | 9.40e-15 | 90 |
bone element | 2.93e-14 | 82 |
skeletal system | 1.87e-13 | 100 |
hematopoietic system | 2.78e-12 | 98 |
blood island | 2.78e-12 | 98 |
immune system | 4.86e-11 | 93 |
hemolymphoid system | 6.64e-10 | 108 |
surface structure | 5.35e-08 | 99 |