FFCP PHASE1:Hg19::chr6:30864435..30864457,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=780 | |EntrezGene=780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2730 | |HGNC=2730 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-333bp_to_uc003nrz.1_5end | |association_with_transcript=-333bp_to_uc003nrz.1_5end | ||
|cluster_id=chr6:30864435..30864457,+ | |||
|coexpression_cluster_id=C3932 | |coexpression_cluster_id=C3932 | ||
|description=CAGE_peak_23_at_DDR1_5end | |description=CAGE_peak_23_at_DDR1_5end | ||
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|ontology_enrichment_celltype=CL:0002076!3.35e-14!43;CL:0000223!4.07e-11!59;CL:0002251!1.96e-08!21 | |ontology_enrichment_celltype=CL:0002076!3.35e-14!43;CL:0000223!4.07e-11!59;CL:0002251!1.96e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0002231;3.92e-38;3!CL:0002621;1.64e-17;3!CL:0002076;9.91e-17;42!CL:0000511;9.12e-14;1!CL:0002625;9.12e-14;1!CL:0000216;9.12e-14;1!CL:0000047;1.59e-07;2!CL:0000650;1.59e-07;2!CL:1000500;1.59e-07;2!CL:1000618;1.59e-07;2!CL:1001318;1.59e-07;2!CL:0002173;1.59e-07;2 | |ontology_enrichment_celltype_v019=CL:0002231;3.92e-38;3!CL:0002621;1.64e-17;3!CL:0002076;9.91e-17;42!CL:0000511;9.12e-14;1!CL:0002625;9.12e-14;1!CL:0000216;9.12e-14;1!CL:0000047;1.59e-07;2!CL:0000650;1.59e-07;2!CL:1000500;1.59e-07;2!CL:1000618;1.59e-07;2!CL:1001318;1.59e-07;2!CL:0002173;1.59e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.84e-38,3;CL:0002076,2.76e-18,42;CL:0002621,9.14e-18,3;CL:0000511,5.85e-14,1;CL:0002625,5.85e-14,1;CL:0000216,5.85e-14,1;CL:0000223,5.00e-13,58;CL:0000650,2.40e-07,2;CL:1000500,2.40e-07,2;CL:1000618,2.40e-07,2;CL:1001318,2.40e-07,2;CL:0002173,2.40e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008801;9.12e-14;1!CL:0000223;1.88e-08;58 | |ontology_enrichment_development_v019=UBERON:0008801;9.12e-14;1!CL:0000223;1.88e-08;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!3.90e-12!173;UBERON:0006601!3.90e-12!173;UBERON:0004121!8.71e-12!169;UBERON:0000033!1.70e-11!123;UBERON:0000153!1.94e-11!129;UBERON:0007811!1.94e-11!129;UBERON:0004119!3.08e-10!169;UBERON:0000925!3.08e-10!169;UBERON:0006595!3.08e-10!169;UBERON:0005743!1.28e-09!86;UBERON:0001017!3.48e-09!82;UBERON:0000475!4.45e-09!365;UBERON:0007023!2.13e-08!115;UBERON:0000161!1.02e-07!35;UBERON:0000073!1.04e-07!94;UBERON:0001016!1.04e-07!94;UBERON:0000468!1.95e-07!659;UBERON:0000062!2.50e-07!511;UBERON:0000922!4.10e-07!612;UBERON:0001007!6.40e-07!155;UBERON:0001555!6.40e-07!155;UBERON:0007026!6.40e-07!155;UBERON:0000166!7.92e-07!21;UBERON:0001049!9.30e-07!57;UBERON:0005068!9.30e-07!57;UBERON:0006241!9.30e-07!57;UBERON:0007135!9.30e-07!57 | |ontology_enrichment_uberon=UBERON:0000924!3.90e-12!173;UBERON:0006601!3.90e-12!173;UBERON:0004121!8.71e-12!169;UBERON:0000033!1.70e-11!123;UBERON:0000153!1.94e-11!129;UBERON:0007811!1.94e-11!129;UBERON:0004119!3.08e-10!169;UBERON:0000925!3.08e-10!169;UBERON:0006595!3.08e-10!169;UBERON:0005743!1.28e-09!86;UBERON:0001017!3.48e-09!82;UBERON:0000475!4.45e-09!365;UBERON:0007023!2.13e-08!115;UBERON:0000161!1.02e-07!35;UBERON:0000073!1.04e-07!94;UBERON:0001016!1.04e-07!94;UBERON:0000468!1.95e-07!659;UBERON:0000062!2.50e-07!511;UBERON:0000922!4.10e-07!612;UBERON:0001007!6.40e-07!155;UBERON:0001555!6.40e-07!155;UBERON:0007026!6.40e-07!155;UBERON:0000166!7.92e-07!21;UBERON:0001049!9.30e-07!57;UBERON:0005068!9.30e-07!57;UBERON:0006241!9.30e-07!57;UBERON:0007135!9.30e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.64e-17;3!UBERON:0001831;9.12e-14;1!UBERON:0001136;9.12e-14;1!UBERON:0001343;9.12e-14;1!UBERON:0004910;9.12e-14;1!UBERON:0004813;9.12e-14;1!UBERON:0001567;9.12e-14;1!UBERON:0002367;6.97e-11;11!UBERON:0010147;6.97e-11;11!UBERON:0000161;1.01e-10;19!UBERON:0000166;1.01e-10;19!UBERON:0003937;5.06e-10;12!UBERON:0005399;5.06e-10;12!UBERON:0003101;2.26e-09;22!UBERON:0000079;2.26e-09;22!UBERON:0003729;3.45e-09;13!UBERON:0003929;4.91e-08;7!UBERON:0000077;1.13e-07;27!UBERON:0001829;1.59e-07;2!UBERON:0003567;1.59e-07;2!UBERON:0003838;1.59e-07;2!UBERON:0003586;1.59e-07;2!UBERON:0004909;1.59e-07;2!UBERON:0005169;1.59e-07;2!UBERON:0002321;1.59e-07;2!UBERON:0005215;1.59e-07;2!UBERON:0002303;1.59e-07;2!UBERON:0004089;1.59e-07;2!UBERON:0002319;1.59e-07;2!UBERON:0000165;2.42e-07;28!UBERON:0003350;3.90e-07;8!UBERON:0001828;3.90e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0001949;1.64e-17;3!UBERON:0001831;9.12e-14;1!UBERON:0001136;9.12e-14;1!UBERON:0001343;9.12e-14;1!UBERON:0004910;9.12e-14;1!UBERON:0004813;9.12e-14;1!UBERON:0001567;9.12e-14;1!UBERON:0002367;6.97e-11;11!UBERON:0010147;6.97e-11;11!UBERON:0000161;1.01e-10;19!UBERON:0000166;1.01e-10;19!UBERON:0003937;5.06e-10;12!UBERON:0005399;5.06e-10;12!UBERON:0003101;2.26e-09;22!UBERON:0000079;2.26e-09;22!UBERON:0003729;3.45e-09;13!UBERON:0003929;4.91e-08;7!UBERON:0000077;1.13e-07;27!UBERON:0001829;1.59e-07;2!UBERON:0003567;1.59e-07;2!UBERON:0003838;1.59e-07;2!UBERON:0003586;1.59e-07;2!UBERON:0004909;1.59e-07;2!UBERON:0005169;1.59e-07;2!UBERON:0002321;1.59e-07;2!UBERON:0005215;1.59e-07;2!UBERON:0002303;1.59e-07;2!UBERON:0004089;1.59e-07;2!UBERON:0002319;1.59e-07;2!UBERON:0000165;2.42e-07;28!UBERON:0003350;3.90e-07;8!UBERON:0001828;3.90e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,9.14e-18,3;UBERON:0000161,1.90e-16,36;UBERON:0001136,5.85e-14,1;UBERON:0001343,5.85e-14,1;UBERON:0004910,5.85e-14,1;UBERON:0005154,5.85e-14,1;UBERON:0005295,5.85e-14,1;UBERON:0004813,5.85e-14,1;UBERON:0005297,5.85e-14,1;UBERON:0005294,5.85e-14,1;UBERON:0010141,5.85e-14,1;UBERON:0005891,5.85e-14,1;UBERON:0004122,9.11e-14,15;UBERON:0001831,1.25e-13,1;UBERON:0001567,1.25e-13,1;UBERON:0008801,1.25e-13,1;UBERON:0003064,3.76e-11,28;UBERON:0002367,5.70e-11,11;UBERON:0010147,5.70e-11,11;UBERON:0009846,5.70e-11,11;UBERON:0003353,5.70e-11,11;UBERON:0004902,5.70e-11,11;UBERON:0003820,5.70e-11,11;UBERON:0009847,5.70e-11,11;UBERON:0003937,4.21e-10,12;UBERON:0005399,4.21e-10,12;UBERON:0003101,1.84e-09,22;UBERON:0000079,1.84e-09,22;UBERON:0000166,2.73e-09,22;UBERON:0003729,3.22e-09,13;UBERON:0003102,3.58e-09,99;UBERON:0000162,9.82e-09,14;UBERON:0001353,9.82e-09,14;UBERON:0000163,9.82e-09,14;UBERON:0006866,9.82e-09,14;UBERON:0000164,9.82e-09,14;UBERON:0000931,9.82e-09,14;UBERON:0004119,5.12e-08,160;UBERON:0000925,5.12e-08,160;UBERON:0006595,5.12e-08,160;UBERON:0004909,1.28e-07,2;UBERON:0001829,1.87e-07,2;UBERON:0004089,1.87e-07,2;UBERON:0003567,2.40e-07,2;UBERON:0003838,2.40e-07,2;UBERON:0003586,2.40e-07,2;UBERON:0005169,2.40e-07,2;UBERON:0002321,2.40e-07,2;UBERON:0005215,2.40e-07,2;UBERON:0002303,2.40e-07,2;UBERON:0002319,2.40e-07,2;UBERON:0000077,3.03e-07,29;UBERON:0003350,3.14e-07,8;UBERON:0001828,3.14e-07,8;UBERON:0000165,4.28e-07,29;UBERON:0000930,4.28e-07,29 | |||
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| ||
|short_description=p23@DDR1 | |short_description=p23@DDR1 | ||
}} | }} |
Latest revision as of 19:21, 17 September 2015
Short description: | p23@DDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_DDR1_5end |
Coexpression cluster: | C3932_Prostate_Small_Keratinocyte_Mallassezderived_Gingival_Sebocyte_Bronchial |
Association with transcript: | -333bp_to_uc003nrz.1_5end |
EntrezGene: | DDR1 |
HGNC: | 2730 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.84e-38 | 3 |
endo-epithelial cell | 2.76e-18 | 42 |
gingival epithelial cell | 9.14e-18 | 3 |
androgen binding protein secreting cell | 5.85e-14 | 1 |
seminiferous tubule epithelial cell | 5.85e-14 | 1 |
Sertoli cell | 5.85e-14 | 1 |
endodermal cell | 5.00e-13 | 58 |
mesangial cell | 2.40e-07 | 2 |
kidney interstitial cell | 2.40e-07 | 2 |
juxtaglomerular complex cell | 2.40e-07 | 2 |
renal interstitial pericyte | 2.40e-07 | 2 |
extraglomerular mesangial cell | 2.40e-07 | 2 |