FFCP PHASE1:Hg19::chr1:15755260..15755300,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79180 | |EntrezGene=79180 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=28670 | |HGNC=28670 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-496bp_to_BC003033_5end | |association_with_transcript=-496bp_to_BC003033_5end | ||
|cluster_id=chr1:15755260..15755300,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_2_at_EFHD2_5end | |description=CAGE_peak_2_at_EFHD2_5end | ||
|id=chr1:15755260..15755300,+ | |id=chr1:15755260..15755300,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.48e-28!76;CL:0000860!1.92e-25!45;CL:0002057!1.48e-24!42;CL:0002194!2.01e-23!63;CL:0000576!2.01e-23!63;CL:0000040!2.01e-23!63;CL:0000559!2.01e-23!63;CL:0000839!4.98e-22!70;CL:0000738!1.09e-21!140;CL:0002009!1.16e-21!65;CL:0000557!2.25e-21!71;CL:0002087!1.59e-18!119;CL:0000763!1.82e-16!112;CL:0000049!1.82e-16!112;CL:0002031!4.54e-16!124;CL:0000037!2.02e-15!172;CL:0000566!2.02e-15!172;CL:0002032!9.46e-15!165;CL:0000837!9.46e-15!165;CL:0000988!5.54e-14!182 | |ontology_enrichment_celltype=CL:0000766!1.48e-28!76;CL:0000860!1.92e-25!45;CL:0002057!1.48e-24!42;CL:0002194!2.01e-23!63;CL:0000576!2.01e-23!63;CL:0000040!2.01e-23!63;CL:0000559!2.01e-23!63;CL:0000839!4.98e-22!70;CL:0000738!1.09e-21!140;CL:0002009!1.16e-21!65;CL:0000557!2.25e-21!71;CL:0002087!1.59e-18!119;CL:0000763!1.82e-16!112;CL:0000049!1.82e-16!112;CL:0002031!4.54e-16!124;CL:0000037!2.02e-15!172;CL:0000566!2.02e-15!172;CL:0002032!9.46e-15!165;CL:0000837!9.46e-15!165;CL:0000988!5.54e-14!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.19e-28;33!CL:0002057;2.19e-28;33!CL:0000473;1.59e-25;39!CL:0000234;1.59e-25;39!CL:0000576;2.08e-20;48!CL:0000766;1.90e-17;69!CL:0000763;4.62e-09;100!CL:0002087;6.69e-09;104!CL:0000738;2.76e-08;136!CL:0000094;1.09e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.57e-39,72;CL:0000473,1.17e-35,48;CL:0000234,1.17e-35,48;CL:0000860,2.32e-33,42;CL:0002057,2.32e-33,42;CL:0002194,5.53e-31,59;CL:0000576,5.53e-31,59;CL:0000040,5.53e-31,59;CL:0000559,5.53e-31,59;CL:0000839,7.67e-31,66;CL:0000738,2.13e-30,136;CL:0000557,4.90e-30,67;CL:0002009,2.95e-29,61;CL:0002087,2.78e-26,115;CL:0000763,6.23e-25,108;CL:0000049,6.23e-25,108;CL:0002031,1.03e-24,120;CL:0000037,5.96e-24,168;CL:0002032,1.09e-23,161;CL:0000837,1.09e-23,161;CL:0000988,3.29e-22,177;CL:0000134,3.60e-08,354;CL:0000094,6.58e-08,8;CL:0002320,1.27e-07,361;CL:0000723,8.41e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;7.85e-24;42!CL:0000049;1.18e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.13e-19!80;UBERON:0002390!6.10e-19!102;UBERON:0003061!6.10e-19!102;UBERON:0001474!3.31e-18!86;UBERON:0004765!1.02e-17!101;UBERON:0001434!1.02e-17!101;UBERON:0002193!1.81e-17!112;UBERON:0002204!1.67e-12!167;UBERON:0002405!1.06e-08!115;UBERON:0003081!1.98e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.62e-27,76;UBERON:0002390,1.88e-26,98;UBERON:0003061,1.88e-26,98;UBERON:0001474,1.84e-24,82;UBERON:0002193,3.17e-22,108;UBERON:0004765,3.20e-21,90;UBERON:0001434,4.69e-20,100;UBERON:0002405,3.02e-19,93;UBERON:0003081,1.22e-12,203;UBERON:0002204,1.63e-12,167;UBERON:0000926,5.17e-08,315;UBERON:0004120,5.17e-08,315;UBERON:0006603,5.17e-08,315;UBERON:0002384,8.62e-07,371 | |||
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| ||
|short_description=p2@EFHD2 | |short_description=p2@EFHD2 | ||
}} | }} |
Latest revision as of 19:13, 17 September 2015
Short description: | p2@EFHD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EFHD2_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -496bp_to_BC003033_5end |
EntrezGene: | EFHD2 |
HGNC: | 28670 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.57e-39 | 72 |
defensive cell | 1.17e-35 | 48 |
phagocyte | 1.17e-35 | 48 |
classical monocyte | 2.32e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.32e-33 | 42 |
monopoietic cell | 5.53e-31 | 59 |
monocyte | 5.53e-31 | 59 |
monoblast | 5.53e-31 | 59 |
promonocyte | 5.53e-31 | 59 |
myeloid lineage restricted progenitor cell | 7.67e-31 | 66 |
leukocyte | 2.13e-30 | 136 |
granulocyte monocyte progenitor cell | 4.90e-30 | 67 |
macrophage dendritic cell progenitor | 2.95e-29 | 61 |
nongranular leukocyte | 2.78e-26 | 115 |
myeloid cell | 6.23e-25 | 108 |
common myeloid progenitor | 6.23e-25 | 108 |
hematopoietic lineage restricted progenitor cell | 1.03e-24 | 120 |
hematopoietic stem cell | 5.96e-24 | 168 |
hematopoietic oligopotent progenitor cell | 1.09e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-23 | 161 |
hematopoietic cell | 3.29e-22 | 177 |
mesenchymal cell | 3.60e-08 | 354 |
granulocyte | 6.58e-08 | 8 |
connective tissue cell | 1.27e-07 | 361 |
somatic stem cell | 8.41e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.62e-27 | 76 |
hematopoietic system | 1.88e-26 | 98 |
blood island | 1.88e-26 | 98 |
bone element | 1.84e-24 | 82 |
hemolymphoid system | 3.17e-22 | 108 |
skeletal element | 3.20e-21 | 90 |
skeletal system | 4.69e-20 | 100 |
immune system | 3.02e-19 | 93 |
lateral plate mesoderm | 1.22e-12 | 203 |
musculoskeletal system | 1.63e-12 | 167 |
mesoderm | 5.17e-08 | 315 |
mesoderm-derived structure | 5.17e-08 | 315 |
presumptive mesoderm | 5.17e-08 | 315 |
connective tissue | 8.62e-07 | 371 |