FFCP PHASE1:Hg19::chr1:157108728..157108744,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2117 | |EntrezGene=2117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3492 | |HGNC=3492 | ||
|TSSclassifier=strong | |||
|UniProt=B4E3M7,P41162 | |UniProt=B4E3M7,P41162 | ||
|association_with_transcript=-345bp_to_NM_001145312,uc001fqr.2,uc001fqt.2_5end | |association_with_transcript=-345bp_to_NM_001145312,uc001fqr.2,uc001fqt.2_5end | ||
|cluster_id=chr1:157108728..157108744,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_5_at_ETV3_5end | |description=CAGE_peak_5_at_ETV3_5end | ||
|id=chr1:157108728..157108744,- | |id=chr1:157108728..157108744,- | ||
|ontology_enrichment_celltype=CL:0000738!2.69e-31!140;CL:0000037!5.33e-25!172;CL:0000566!5.33e-25!172;CL:0000988!1.62e-23!182;CL:0002031!5.17e-22!124;CL:0002032!4.15e-21!165;CL:0000837!4.15e-21!165;CL:0002087!3.37e-20!119;CL:0000451!2.14e-15!10;CL:0000557!1.12e-14!71;CL:0000766!5.43e-14!76;CL:0000763!2.65e-12!112;CL:0000049!2.65e-12!112;CL:0002009!4.08e-12!65;CL:0000990!4.45e-12!8;CL:0000219!1.70e-11!390;CL:0000839!2.43e-11!70;CL:0002057!4.90e-11!42;CL:0000624!2.28e-10!6;CL:0002194!2.40e-10!63;CL:0000576!2.40e-10!63;CL:0000040!2.40e-10!63;CL:0000559!2.40e-10!63;CL:0000453!4.62e-10!5;CL:0000860!6.49e-10!45;CL:0000084!1.97e-09!25;CL:0000827!1.97e-09!25;CL:0000838!3.20e-09!52;CL:0000542!6.19e-09!53;CL:0000051!6.19e-09!53;CL:0000134!1.03e-08!358;CL:0002320!1.22e-08!365;CL:0000148!1.25e-07!10;CL:0000541!1.25e-07!10;CL:0000840!3.13e-07!5;CL:0001029!3.13e-07!5;CL:0000784!9.05e-07!3 | |ontology_enrichment_celltype=CL:0000738!2.69e-31!140;CL:0000037!5.33e-25!172;CL:0000566!5.33e-25!172;CL:0000988!1.62e-23!182;CL:0002031!5.17e-22!124;CL:0002032!4.15e-21!165;CL:0000837!4.15e-21!165;CL:0002087!3.37e-20!119;CL:0000451!2.14e-15!10;CL:0000557!1.12e-14!71;CL:0000766!5.43e-14!76;CL:0000763!2.65e-12!112;CL:0000049!2.65e-12!112;CL:0002009!4.08e-12!65;CL:0000990!4.45e-12!8;CL:0000219!1.70e-11!390;CL:0000839!2.43e-11!70;CL:0002057!4.90e-11!42;CL:0000624!2.28e-10!6;CL:0002194!2.40e-10!63;CL:0000576!2.40e-10!63;CL:0000040!2.40e-10!63;CL:0000559!2.40e-10!63;CL:0000453!4.62e-10!5;CL:0000860!6.49e-10!45;CL:0000084!1.97e-09!25;CL:0000827!1.97e-09!25;CL:0000838!3.20e-09!52;CL:0000542!6.19e-09!53;CL:0000051!6.19e-09!53;CL:0000134!1.03e-08!358;CL:0002320!1.22e-08!365;CL:0000148!1.25e-07!10;CL:0000541!1.25e-07!10;CL:0000840!3.13e-07!5;CL:0001029!3.13e-07!5;CL:0000784!9.05e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000451;2.59e-36;10!CL:0000453;6.19e-32;5!CL:0000990;3.05e-25;8!CL:0000784;3.47e-20;3!CL:0000623;5.94e-19;3!CL:0000624;2.86e-16;6!CL:0000791;1.60e-15;18!CL:0000789;1.60e-15;18!CL:0002419;1.60e-15;18!CL:0001014;8.05e-14;2!CL:0001016;8.05e-14;2!CL:0000084;6.09e-11;25!CL:0000840;2.99e-10;5!CL:0000226;4.87e-09;3!CL:0000842;4.87e-09;3!CL:0002032;1.47e-07;1!CL:0000557;1.47e-07;1!CL:0000895;3.10e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000451,2.49e-36,10;CL:0000453,5.84e-32,5;CL:0000990,2.94e-25,8;CL:0000738,5.03e-21,136;CL:0000784,3.47e-20,3;CL:0000623,9.42e-19,3;CL:0000825,9.42e-19,3;CL:0000037,8.92e-18,168;CL:0000988,1.27e-16,177;CL:0000624,1.88e-16,6;CL:0000791,1.25e-15,18;CL:0000789,1.25e-15,18;CL:0002420,1.25e-15,18;CL:0002419,1.25e-15,18;CL:0000790,1.25e-15,18;CL:0001014,8.06e-14,2;CL:0001016,8.06e-14,2;CL:0002032,2.46e-12,161;CL:0000837,2.46e-12,161;CL:0000084,5.12e-11,25;CL:0000827,5.12e-11,25;CL:0000840,3.00e-10,5;CL:0001029,3.00e-10,5;CL:0002087,4.99e-10,115;CL:0000838,7.38e-10,52;CL:0000542,1.22e-09,53;CL:0000051,1.22e-09,53;CL:0002031,1.44e-09,120;CL:0000226,5.29e-09,3;CL:0000842,5.29e-09,3;CL:0000810,2.83e-07,1;CL:0000895,2.83e-07,1;CL:0002436,2.83e-07,1;CL:0002427,2.83e-07,1;CL:0002428,2.83e-07,1;CL:0002429,2.83e-07,1;CL:0002433,2.83e-07,1;CL:0002431,2.83e-07,1;CL:0002432,2.83e-07,1;CL:0000219,5.70e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000790;1.60e-15;18!CL:0002427;3.10e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.88e-13!80;UBERON:0001474!1.95e-12!86;UBERON:0002390!2.63e-12!102;UBERON:0003061!2.63e-12!102;UBERON:0002193!2.78e-10!112;UBERON:0004765!6.48e-10!101;UBERON:0001434!6.48e-10!101;UBERON:0002405!8.37e-09!115;UBERON:0002384!9.92e-09!375 | |ontology_enrichment_uberon=UBERON:0002371!4.88e-13!80;UBERON:0001474!1.95e-12!86;UBERON:0002390!2.63e-12!102;UBERON:0003061!2.63e-12!102;UBERON:0002193!2.78e-10!112;UBERON:0004765!6.48e-10!101;UBERON:0001434!6.48e-10!101;UBERON:0002405!8.37e-09!115;UBERON:0002384!9.92e-09!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0.786728553697808,1.91914699048606,0.464448369948228,0,0,0,0,0,0.587200878669695,1.10799081706375,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0.145398238779565,0,0.485168122375632,0,1.23350366406548,0.309706370895104,0,0,0,0,0.645484683583826,2.70852973188684,0.752969358170419,0.545812300115692,0.449446968890169,0.306083892370903,0.962787081228281,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0.632924774881769,0,0.425208599930087,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,2.64342657158052,1.68152568894461,0,1.57367816091066,1.96505381374582,3.08402248499264,0,0.32592226663359,0.946895611469467,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0,0,0,1.03800594213442,0.267540828089713,0,0,1.53288197440768,1.03088233644789,0.506039384039006,0,0,0,0,0,0,0,0,2.41928091869679,1.87208137048455,1.15859523106239,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0.26591592103773,20.0332124416487,8.57992366170192,11.5151825412165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0.265059536642971,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0.144119953416961,0.37872730027914,0.63497894292169,0.381988425558278,0,1.71072446022705,1.23392991243988,1.50171528921959,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36436912242313,2.58753089831421,1.15508732651774,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,1.07857100409308,2.98837161849644,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.482259445395058,0,0,7.64911231275102,3.86900977278975,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909894705249887,2.85465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0.159296767163702,0,0,0,0,0,0,0,0,0.363697318405119,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89720617678777,4.38453973034098,9.15966207832728,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0.397832444232549,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0.378499274505237,0.218531143927391,0,0.101988829741982,0,0.0918948995348449,0.250707539292375,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0.786728553697808,1.91914699048606,0.464448369948228,0,0,0,0,0,0.587200878669695,1.10799081706375,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0.145398238779565,0,0.485168122375632,0,1.23350366406548,0.309706370895104,0,0,0,0,0.645484683583826,2.70852973188684,0.752969358170419,0.545812300115692,0.449446968890169,0.306083892370903,0.962787081228281,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0.632924774881769,0,0.425208599930087,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,2.64342657158052,1.68152568894461,0,1.57367816091066,1.96505381374582,3.08402248499264,0,0.32592226663359,0.946895611469467,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0,0,0,1.03800594213442,0.267540828089713,0,0,1.53288197440768,1.03088233644789,0.506039384039006,0,0,0,0,0,0,0,0,2.41928091869679,1.87208137048455,1.15859523106239,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0.26591592103773,20.0332124416487,8.57992366170192,11.5151825412165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0.265059536642971,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0.144119953416961,0.37872730027914,0.63497894292169,0.381988425558278,0,1.71072446022705,1.23392991243988,1.50171528921959,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36436912242313,2.58753089831421,1.15508732651774,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,1.07857100409308,2.98837161849644,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.482259445395058,0,0,7.64911231275102,3.86900977278975,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909894705249887,2.85465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0.159296767163702,0,0,0,0,0,0,0,0,0.363697318405119,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89720617678777,4.38453973034098,9.15966207832728,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0.397832444232549,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0.378499274505237,0.218531143927391,0,0.101988829741982,0,0.0918948995348449,0.250707539292375,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p5@ETV3 | |short_description=p5@ETV3 | ||
}} | }} |
Latest revision as of 18:56, 17 September 2015
Short description: | p5@ETV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ETV3_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | -345bp_to_NM_001145312, uc001fqr.2, uc001fqt.2_5end |
EntrezGene: | ETV3 |
HGNC: | 3492 |
UniProt: | B4E3M7P41162 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data