FFCP PHASE1:Hg19::chr10:27529437..27529461,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:27529437..27529461,-
|short_description=p4@ACBD5
|description=CAGE_peak_4_at_ACBD5_5end
|association_with_transcript=25bp_to_ENST00000375888_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91452 | |EntrezGene=91452 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23338 | |HGNC=23338 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T8D3 | |UniProt=Q5T8D3 | ||
|association_with_transcript=25bp_to_ENST00000375888_5end | |||
|cluster_id=chr10:27529437..27529461,- | |||
|description=CAGE_peak_4_at_ACBD5_5end | |||
|id=chr10:27529437..27529461,- | |||
|ontology_enrichment_celltype=CL:0000766!2.83e-29!76;CL:0000557!6.21e-28!71;CL:0000763!1.99e-27!112;CL:0000049!1.99e-27!112;CL:0002009!1.51e-25!65;CL:0002194!1.29e-24!63;CL:0000576!1.29e-24!63;CL:0000040!1.29e-24!63;CL:0000559!1.29e-24!63;CL:0000839!1.75e-24!70;CL:0002057!1.28e-20!42;CL:0000860!1.78e-20!45;CL:0000037!4.26e-15!172;CL:0000566!4.26e-15!172;CL:0000738!1.06e-14!140;CL:0002032!1.90e-13!165;CL:0000837!1.90e-13!165;CL:0000988!2.63e-12!182;CL:0002031!5.35e-10!124;CL:0002087!2.10e-09!119;CL:0002393!4.89e-07!9;CL:0002397!4.89e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.20e-15;48!CL:0000860;9.85e-15;33!CL:0002057;9.85e-15;33!CL:0000766;1.13e-13;69!CL:0000473;2.09e-13;39!CL:0000234;2.09e-13;39!CL:0000763;2.32e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.37e-31,72;CL:0000557,2.75e-29,67;CL:0000763,2.34e-28,108;CL:0000049,2.34e-28,108;CL:0002009,7.53e-27,61;CL:0002194,6.88e-26,59;CL:0000576,6.88e-26,59;CL:0000040,6.88e-26,59;CL:0000559,6.88e-26,59;CL:0000839,1.12e-25,66;CL:0000473,2.53e-21,48;CL:0000234,2.53e-21,48;CL:0000860,4.21e-21,42;CL:0002057,4.21e-21,42;CL:0000037,1.28e-15,168;CL:0000738,2.29e-15,136;CL:0002032,8.28e-14,161;CL:0000837,8.28e-14,161;CL:0000988,3.73e-13,177;CL:0002031,2.76e-10,120;CL:0002087,1.19e-09,115;CL:0002393,3.55e-07,9;CL:0002397,3.55e-07,9;CL:0000451,9.46e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;6.01e-16;42!CL:0000049;3.10e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.88e-26,76;UBERON:0002390,2.04e-25,98;UBERON:0003061,2.04e-25,98;UBERON:0001474,1.22e-24,82;UBERON:0004765,5.87e-22,90;UBERON:0002193,6.03e-22,108;UBERON:0001434,8.98e-22,100;UBERON:0002405,9.12e-20,93;UBERON:0002204,5.68e-08,167;UBERON:0003081,1.54e-07,203 | |||
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| ||
|short_description=p4@ACBD5 | |||
}} | }} |
Latest revision as of 18:55, 17 September 2015
Short description: | p4@ACBD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACBD5_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000375888_5end |
EntrezGene: | ACBD5 |
HGNC: | 23338 |
UniProt: | Q5T8D3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.37e-31 | 72 |
granulocyte monocyte progenitor cell | 2.75e-29 | 67 |
myeloid cell | 2.34e-28 | 108 |
common myeloid progenitor | 2.34e-28 | 108 |
macrophage dendritic cell progenitor | 7.53e-27 | 61 |
monopoietic cell | 6.88e-26 | 59 |
monocyte | 6.88e-26 | 59 |
monoblast | 6.88e-26 | 59 |
promonocyte | 6.88e-26 | 59 |
myeloid lineage restricted progenitor cell | 1.12e-25 | 66 |
defensive cell | 2.53e-21 | 48 |
phagocyte | 2.53e-21 | 48 |
classical monocyte | 4.21e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.21e-21 | 42 |
hematopoietic stem cell | 1.28e-15 | 168 |
leukocyte | 2.29e-15 | 136 |
hematopoietic oligopotent progenitor cell | 8.28e-14 | 161 |
hematopoietic multipotent progenitor cell | 8.28e-14 | 161 |
hematopoietic cell | 3.73e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 2.76e-10 | 120 |
nongranular leukocyte | 1.19e-09 | 115 |
intermediate monocyte | 3.55e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.55e-07 | 9 |
dendritic cell | 9.46e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.88e-26 | 76 |
hematopoietic system | 2.04e-25 | 98 |
blood island | 2.04e-25 | 98 |
bone element | 1.22e-24 | 82 |
skeletal element | 5.87e-22 | 90 |
hemolymphoid system | 6.03e-22 | 108 |
skeletal system | 8.98e-22 | 100 |
immune system | 9.12e-20 | 93 |
musculoskeletal system | 5.68e-08 | 167 |
lateral plate mesoderm | 1.54e-07 | 203 |