FFCP PHASE1:Hg19::chr10:27529408..27529427,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:27529408..27529427,-
|short_description=p2@ACBD5
|description=CAGE_peak_2_at_ACBD5_5end
|association_with_transcript=59bp_to_ENST00000375888_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91452 | |EntrezGene=91452 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23338 | |HGNC=23338 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T8D3 | |UniProt=Q5T8D3 | ||
|association_with_transcript=59bp_to_ENST00000375888_5end | |||
|cluster_id=chr10:27529408..27529427,- | |||
|description=CAGE_peak_2_at_ACBD5_5end | |||
|id=chr10:27529408..27529427,- | |||
|ontology_enrichment_celltype=CL:0000766!9.80e-22!76;CL:0002009!3.20e-21!65;CL:0002194!3.76e-20!63;CL:0000576!3.76e-20!63;CL:0000040!3.76e-20!63;CL:0000559!3.76e-20!63;CL:0000557!4.02e-20!71;CL:0000839!1.11e-16!70;CL:0000763!9.82e-15!112;CL:0000049!9.82e-15!112;CL:0000860!5.20e-13!45;CL:0002057!1.01e-11!42;CL:0000451!7.95e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000473;8.66e-10;39!CL:0000234;8.66e-10;39!CL:0000576;1.57e-09;48!CL:0000766;5.94e-09;69!CL:0000860;3.30e-08;33!CL:0002057;3.30e-08;33!CL:0000451;7.35e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.40e-21,72;CL:0002009,1.89e-20,61;CL:0002194,2.26e-19,59;CL:0000576,2.26e-19,59;CL:0000040,2.26e-19,59;CL:0000559,2.26e-19,59;CL:0000557,3.87e-19,67;CL:0000839,7.55e-16,66;CL:0000473,4.83e-15,48;CL:0000234,4.83e-15,48;CL:0000763,3.46e-14,108;CL:0000049,3.46e-14,108;CL:0000860,9.14e-12,42;CL:0002057,9.14e-12,42;CL:0000451,7.10e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;5.35e-09;42 | |||
|ontology_enrichment_disease=DOID:305!2.16e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.01e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002371!5.82e-17!80;UBERON:0001474!2.25e-16!86;UBERON:0004765!1.64e-15!101;UBERON:0001434!1.64e-15!101;UBERON:0002390!5.98e-15!102;UBERON:0003061!5.98e-15!102;UBERON:0002405!4.08e-13!115;UBERON:0002193!2.88e-12!112;UBERON:0000062!4.01e-11!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.16e-16,76;UBERON:0001474,2.33e-15,82;UBERON:0002390,4.07e-14,98;UBERON:0003061,4.07e-14,98;UBERON:0004765,4.23e-14,90;UBERON:0001434,5.38e-14,100;UBERON:0002193,1.43e-11,108;UBERON:0002405,6.04e-11,93 | |||
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| ||
|short_description=p2@ACBD5 | |||
}} | }} |
Latest revision as of 18:54, 17 September 2015
Short description: | p2@ACBD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACBD5_5end |
Coexpression cluster: | NA |
Association with transcript: | 59bp_to_ENST00000375888_5end |
EntrezGene: | ACBD5 |
HGNC: | 23338 |
UniProt: | Q5T8D3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.40e-21 | 72 |
macrophage dendritic cell progenitor | 1.89e-20 | 61 |
monopoietic cell | 2.26e-19 | 59 |
monocyte | 2.26e-19 | 59 |
monoblast | 2.26e-19 | 59 |
promonocyte | 2.26e-19 | 59 |
granulocyte monocyte progenitor cell | 3.87e-19 | 67 |
myeloid lineage restricted progenitor cell | 7.55e-16 | 66 |
defensive cell | 4.83e-15 | 48 |
phagocyte | 4.83e-15 | 48 |
myeloid cell | 3.46e-14 | 108 |
common myeloid progenitor | 3.46e-14 | 108 |
classical monocyte | 9.14e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.14e-12 | 42 |
dendritic cell | 7.10e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.16e-16 | 76 |
bone element | 2.33e-15 | 82 |
hematopoietic system | 4.07e-14 | 98 |
blood island | 4.07e-14 | 98 |
skeletal element | 4.23e-14 | 90 |
skeletal system | 5.38e-14 | 100 |
hemolymphoid system | 1.43e-11 | 108 |
immune system | 6.04e-11 | 93 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.01e-08 | 106 |