FFCP PHASE1:Hg19::chr4:40632590..40632601,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54502 | |EntrezGene=54502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30358 | |HGNC=30358 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z8Z7 | |UniProt=B7Z8Z7 | ||
|association_with_transcript=38bp_to_ENST00000514014,uc011bys.1_5end | |association_with_transcript=38bp_to_ENST00000514014,uc011bys.1_5end | ||
|cluster_id=chr4:40632590..40632601,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_12_at_RBM47_5end | |description=CAGE_peak_12_at_RBM47_5end | ||
|id=chr4:40632590..40632601,- | |id=chr4:40632590..40632601,- | ||
|ontology_enrichment_celltype=CL:0000766!2.92e-52!76;CL:0002009!3.38e-48!65;CL:0000557!6.14e-47!71;CL:0002194!2.76e-46!63;CL:0000576!2.76e-46!63;CL:0000040!2.76e-46!63;CL:0000559!2.76e-46!63;CL:0002057!3.85e-46!42;CL:0000860!2.17e-43!45;CL:0000839!3.25e-42!70;CL:0000738!1.12e-40!140;CL:0000763!1.32e-37!112;CL:0000049!1.32e-37!112;CL:0000037!4.09e-30!172;CL:0000566!4.09e-30!172;CL:0002087!1.37e-29!119;CL:0002032!1.28e-27!165;CL:0000837!1.28e-27!165;CL:0002031!4.53e-27!124;CL:0000988!1.03e-26!182;CL:0000451!2.40e-11!10;CL:0002393!3.48e-10!9;CL:0002397!3.48e-10!9;CL:0000990!5.53e-10!8;CL:0000094!2.74e-09!8;CL:0000840!3.40e-07!5;CL:0001029!3.40e-07!5 | |ontology_enrichment_celltype=CL:0000766!2.92e-52!76;CL:0002009!3.38e-48!65;CL:0000557!6.14e-47!71;CL:0002194!2.76e-46!63;CL:0000576!2.76e-46!63;CL:0000040!2.76e-46!63;CL:0000559!2.76e-46!63;CL:0002057!3.85e-46!42;CL:0000860!2.17e-43!45;CL:0000839!3.25e-42!70;CL:0000738!1.12e-40!140;CL:0000763!1.32e-37!112;CL:0000049!1.32e-37!112;CL:0000037!4.09e-30!172;CL:0000566!4.09e-30!172;CL:0002087!1.37e-29!119;CL:0002032!1.28e-27!165;CL:0000837!1.28e-27!165;CL:0002031!4.53e-27!124;CL:0000988!1.03e-26!182;CL:0000451!2.40e-11!10;CL:0002393!3.48e-10!9;CL:0002397!3.48e-10!9;CL:0000990!5.53e-10!8;CL:0000094!2.74e-09!8;CL:0000840!3.40e-07!5;CL:0001029!3.40e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.89e-74;33!CL:0002057;8.89e-74;33!CL:0000473;8.92e-65;39!CL:0000234;8.92e-65;39!CL:0000576;1.35e-60;48!CL:0000766;4.12e-43;69!CL:0000763;3.54e-21;100!CL:0000738;2.24e-17;136!CL:0000451;1.97e-16;10!CL:0000990;2.32e-16;8!CL:0002087;1.20e-15;104!CL:0000094;6.39e-15;8!CL:0002393;1.37e-14;6!CL:0002397;1.37e-14;6!CL:0000453;9.59e-12;5!CL:0000081;1.56e-10;11!CL:0000840;1.68e-10;5!CL:0000988;2.90e-09;177!CL:0000775;1.57e-08;3!CL:0000219;4.22e-08;193!CL:0002619;2.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.15e-107,72;CL:0002009,8.51e-106,61;CL:0002194,1.76e-101,59;CL:0000576,1.76e-101,59;CL:0000040,1.76e-101,59;CL:0000559,1.76e-101,59;CL:0000473,2.08e-100,48;CL:0000234,2.08e-100,48;CL:0000557,7.56e-99,67;CL:0000860,4.10e-97,42;CL:0002057,4.10e-97,42;CL:0000839,2.27e-89,66;CL:0000763,1.44e-85,108;CL:0000049,1.44e-85,108;CL:0000738,1.38e-71,136;CL:0000037,1.22e-58,168;CL:0002032,5.01e-56,161;CL:0000837,5.01e-56,161;CL:0000988,8.23e-55,177;CL:0002087,5.65e-54,115;CL:0002031,3.53e-51,120;CL:0000134,5.60e-19,354;CL:0002320,2.77e-18,361;CL:0002393,8.52e-17,9;CL:0002397,8.52e-17,9;CL:0000990,1.77e-16,8;CL:0000451,1.97e-16,10;CL:0000219,7.69e-16,386;CL:0000094,7.24e-15,8;CL:0000048,7.28e-13,427;CL:0000723,1.87e-12,433;CL:0000034,6.30e-12,441;CL:0000453,7.60e-12,5;CL:0000081,1.70e-10,11;CL:0000840,2.24e-10,5;CL:0001029,2.24e-10,5;CL:0000775,1.23e-08,3;CL:0002619,1.26e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.29e-68;42!CL:0000049;6.71e-24;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.09e-45!102;UBERON:0003061!1.09e-45!102;UBERON:0002193!1.08e-41!112;UBERON:0002371!6.10e-39!80;UBERON:0001474!6.97e-36!86;UBERON:0002405!2.59e-30!115;UBERON:0004765!2.88e-30!101;UBERON:0001434!2.88e-30!101;UBERON:0003081!1.57e-11!216;UBERON:0002204!2.30e-10!167;UBERON:0007023!7.42e-08!115 | |ontology_enrichment_uberon=UBERON:0002390!1.09e-45!102;UBERON:0003061!1.09e-45!102;UBERON:0002193!1.08e-41!112;UBERON:0002371!6.10e-39!80;UBERON:0001474!6.97e-36!86;UBERON:0002405!2.59e-30!115;UBERON:0004765!2.88e-30!101;UBERON:0001434!2.88e-30!101;UBERON:0003081!1.57e-11!216;UBERON:0002204!2.30e-10!167;UBERON:0007023!7.42e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.32e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.63e-88,98;UBERON:0003061,3.63e-88,98;UBERON:0002371,1.51e-85,76;UBERON:0002193,2.42e-81,108;UBERON:0002405,1.07e-78,93;UBERON:0001474,2.78e-78,82;UBERON:0004765,4.33e-70,90;UBERON:0001434,1.12e-61,100;UBERON:0003081,1.89e-34,203;UBERON:0002204,3.25e-31,167;UBERON:0000926,1.75e-17,315;UBERON:0004120,1.75e-17,315;UBERON:0006603,1.75e-17,315;UBERON:0002384,2.45e-17,371;UBERON:0002106,1.04e-07,3;UBERON:0004854,1.04e-07,3;UBERON:0009034,1.04e-07,3;UBERON:0002095,1.04e-07,3;UBERON:0004782,1.04e-07,3;UBERON:0003281,1.04e-07,3;UBERON:0009664,1.04e-07,3;UBERON:0002296,1.04e-07,3;UBERON:0005602,1.04e-07,3;UBERON:0001179,1.04e-07,3;UBERON:0006293,1.04e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.57470412614962,0.472264687882075,0.786728553697808,1.15148819429164,1.23852898652861,0.919421224478927,0,0,0,0,0,2.21598163412751,4.41197784434312,3.25516306073778,1.56740831967947,1.29557466407592,1.80302897343931,2.90796477559129,4.91238726795452,3.88134497900506,4.41615170120801,6.16751832032739,5.88442104700697,8.34307937734236,14.3449995656296,9.69577142543199,5.86067657252252,6.45484683583826,9.47985406160392,3.57660445130949,4.91231070104122,3.14612878223118,5.20342617030534,8.02322567690234,5.11469700639233,11.5447955065351,10.1726465387032,10.2293940127847,5.22376629531451,8.5107783703671,6.22822248995575,9.2962006144995,10.429658368404,9.55630916702513,4.23779651843358,4.78760926783834,8.22802207346299,1.90129757680748,3.61427309940574,2.72556239160889,1.23561494261145,1.95229960693958,1.28580469357664,2.85012743741249,3.38158351238453,0.91332076882317,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.327447688744282,0,0,5.8418530857843,5.92041106817509,2.39324328933957,0.715471872916026,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.397589304964456,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,1.23108503043699,0.936017060556951,1.33768046059855,0.93733833986777,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.00902836572851,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,3.74503511973591,2.99161459204025,8.70272578215674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.50999940573032,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,1.52927441428475,1.70894156152249,0.952927101831156,1.23408681925858,0.648473311192717,1.08006287447623,0.79312517629427,0.320472213382419,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0,1.27753871307098,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,2.21552649829925,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,1.27126825146383,0.236387681767936,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0.153900517007594,0,0.46112780877612,0.448788222048861,0.108647371922008,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0.364909578431332,0.391329237864179,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0.0821154570532092,0.193978032976839,0.353024506766001,0,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0.213452994739353,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0.136905378891993,1.27746588066972,0,0,0,0.229160424011684,0,0.599037001496973,0,0,0,0,0,0,0,0,0.590564889088493,0.338693328263138,0,0.272406812223151,0.321506296930038,0.275078873194468,0,1.1248694577575,3.0952078182318,0.0607495566580247,0,0.236417121897595,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0,0,0,0.533937062838473,0.628817220398664,0,1.48849806543585,0,0,0,0.544017803369474,0,0.306345576763462,0,0.157054096250234,0,0,0.250381861413,1.14681839138014,0.110929051536852,0.18628920882415,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,2.53318401491205,1.99297260470045,1.63565394255844,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,1.09651553371436,0,0,0.255524855279191,0,0.336283722218824,0,0,0.177404740325278,0.691403925334676,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0.860454717640555,0,0,0.846774100381858,0.22910686854405,0.31020638566432,0,0.559277158988962,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0.196308467114945,0.594092800654172,0,0,1.59772660565751,1.48253142339228,2.19870543034844,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0.378499274505237,0.109265571963696,0,0.815910637935854,0.534434810531121,0.36757959813938,2.25636785363138,0.151557396436479,0,0,0.20686599172379,0.2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| ||
|short_description=p12@RBM47 | |short_description=p12@RBM47 | ||
}} | }} |
Latest revision as of 18:52, 17 September 2015
Short description: | p12@RBM47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_RBM47_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 38bp_to_ENST00000514014, uc011bys.1_5end |
EntrezGene: | RBM47 |
HGNC: | 30358 |
UniProt: | B7Z8Z7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.63e-88 | 98 |
blood island | 3.63e-88 | 98 |
bone marrow | 1.51e-85 | 76 |
hemolymphoid system | 2.42e-81 | 108 |
immune system | 1.07e-78 | 93 |
bone element | 2.78e-78 | 82 |
skeletal element | 4.33e-70 | 90 |
skeletal system | 1.12e-61 | 100 |
lateral plate mesoderm | 1.89e-34 | 203 |
musculoskeletal system | 3.25e-31 | 167 |
mesoderm | 1.75e-17 | 315 |
mesoderm-derived structure | 1.75e-17 | 315 |
presumptive mesoderm | 1.75e-17 | 315 |
connective tissue | 2.45e-17 | 371 |
spleen | 1.04e-07 | 3 |
gastrointestinal system mesentery | 1.04e-07 | 3 |
stomach region | 1.04e-07 | 3 |
mesentery | 1.04e-07 | 3 |
gastrointestinal system serosa | 1.04e-07 | 3 |
mesentery of stomach | 1.04e-07 | 3 |
gut mesentery | 1.04e-07 | 3 |
dorsal mesentery | 1.04e-07 | 3 |
dorsal mesogastrium | 1.04e-07 | 3 |
peritoneal cavity | 1.04e-07 | 3 |
spleen primordium | 1.04e-07 | 3 |