FFCP PHASE1:Hg19::chr10:27444086..27444105,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10730 | |EntrezGene=10730 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12843 | |HGNC=12843 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=89bp_to_ENST00000477432_5end | |association_with_transcript=89bp_to_ENST00000477432_5end | ||
|cluster_id=chr10:27444086..27444105,- | |||
|coexpression_cluster_id=C675 | |coexpression_cluster_id=C675 | ||
|description=CAGE_peak_4_at_YME1L1_5end | |description=CAGE_peak_4_at_YME1L1_5end | ||
|id=chr10:27444086..27444105,- | |id=chr10:27444086..27444105,- | ||
|ontology_enrichment_celltype=CL:0000860;1.04e-30;33!CL:0002057;1.04e-30;33!CL:0000473;1.30e-22;39!CL:0000234;1.30e-22;39!CL:0000576;2.14e-21;48!CL:0000766;7.75e-18;69!CL:0002087;4.07e-16;104!CL:0000738;1.78e-13;136!CL:0000542;3.66e-11;53!CL:0000094;1.52e-09;8!CL:0000988;1.99e-09;177!CL:0000084;2.31e-09;25!CL:0000791;2.62e-09;18!CL:0000789;2.62e-09;18!CL:0002419;2.62e-09;18!CL:0000763;1.42e-08;100!CL:0000945;5.01e-08;24!CL:0000081;6.46e-08;11!CL:0000219;8.51e-08;193!CL:0000236;8.72e-08;13!CL:0000624;2.07e-07;6!CL:0002393;3.75e-07;6!CL:0002397;3.75e-07;6 | |ontology_enrichment_celltype=CL:0000738!1.63e-41!140;CL:0000037!2.31e-35!172;CL:0000566!2.31e-35!172;CL:0000988!2.10e-33!182;CL:0002087!3.75e-33!119;CL:0002031!6.58e-33!124;CL:0002032!6.33e-32!165;CL:0000837!6.33e-32!165;CL:0002057!1.76e-25!42;CL:0000766!1.07e-23!76;CL:0000860!1.81e-23!45;CL:0000557!1.76e-20!71;CL:0002009!5.32e-20!65;CL:0002194!6.19e-19!63;CL:0000576!6.19e-19!63;CL:0000040!6.19e-19!63;CL:0000559!6.19e-19!63;CL:0000763!1.33e-18!112;CL:0000049!1.33e-18!112;CL:0000839!3.84e-18!70;CL:0000134!2.71e-16!358;CL:0002320!7.16e-15!365;CL:0000838!2.36e-13!52;CL:0000219!4.95e-13!390;CL:0000542!1.45e-12!53;CL:0000051!1.45e-12!53;CL:0000034!1.27e-09!444;CL:0000048!2.30e-09!430;CL:0000723!3.02e-09!436;CL:0000063!1.03e-08!578;CL:0000945!2.29e-07!24;CL:0000826!2.29e-07!24 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.04e-30;33!CL:0002057;1.04e-30;33!CL:0000473;1.30e-22;39!CL:0000234;1.30e-22;39!CL:0000576;2.14e-21;48!CL:0000766;7.75e-18;69!CL:0002087;4.07e-16;104!CL:0000738;1.78e-13;136!CL:0000542;3.66e-11;53!CL:0000094;1.52e-09;8!CL:0000988;1.99e-09;177!CL:0000084;2.31e-09;25!CL:0000791;2.62e-09;18!CL:0000789;2.62e-09;18!CL:0002419;2.62e-09;18!CL:0000763;1.42e-08;100!CL:0000945;5.01e-08;24!CL:0000081;6.46e-08;11!CL:0000219;8.51e-08;193!CL:0000236;8.72e-08;13!CL:0000624;2.07e-07;6!CL:0002393;3.75e-07;6!CL:0002397;3.75e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.90e-65,136;CL:0000037,3.75e-53,168;CL:0000988,3.67e-52,177;CL:0002087,5.26e-51,115;CL:0002031,8.88e-51,120;CL:0002032,1.52e-47,161;CL:0000837,1.52e-47,161;CL:0000860,1.09e-41,42;CL:0002057,1.09e-41,42;CL:0000766,1.45e-37,72;CL:0000473,2.09e-37,48;CL:0000234,2.09e-37,48;CL:0000557,3.79e-32,67;CL:0002009,1.01e-30,61;CL:0002194,6.16e-29,59;CL:0000576,6.16e-29,59;CL:0000040,6.16e-29,59;CL:0000559,6.16e-29,59;CL:0000839,1.95e-28,66;CL:0000763,5.56e-27,108;CL:0000049,5.56e-27,108;CL:0000134,8.96e-23,354;CL:0002320,1.73e-21,361;CL:0000838,3.15e-19,52;CL:0000542,1.31e-18,53;CL:0000051,1.31e-18,53;CL:0000219,1.73e-17,386;CL:0000048,1.02e-15,427;CL:0000034,1.67e-15,441;CL:0000723,6.56e-15,433;CL:0000094,1.50e-09,8;CL:0000084,1.62e-09,25;CL:0000827,1.62e-09,25;CL:0002393,1.76e-09,9;CL:0002397,1.76e-09,9;CL:0000791,1.96e-09,18;CL:0000789,1.96e-09,18;CL:0002420,1.96e-09,18;CL:0002419,1.96e-09,18;CL:0000790,1.96e-09,18;CL:0000236,1.08e-08,14;CL:0000945,2.69e-08,24;CL:0000826,2.69e-08,24;CL:0000081,6.27e-08,11;CL:0000624,2.05e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;3.74e-30;42!CL:0000051;3.66e-11;53!CL:0000790;2.62e-09;18!CL:0000049;2.84e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.25e-18!80;UBERON:0001474!2.68e-18!86;UBERON:0002390!8.84e-18!102;UBERON:0003061!8.84e-18!102;UBERON:0002193!1.38e-15!112;UBERON:0002384!1.80e-14!375;UBERON:0004765!6.20e-14!101;UBERON:0001434!6.20e-14!101;UBERON:0002405!8.36e-14!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.43e-29,76;UBERON:0001474,3.37e-28,82;UBERON:0002390,2.87e-27,98;UBERON:0003061,2.87e-27,98;UBERON:0002193,2.41e-24,108;UBERON:0004765,7.55e-24,90;UBERON:0002405,1.95e-23,93;UBERON:0001434,3.07e-21,100;UBERON:0002384,7.88e-21,371;UBERON:0003081,1.86e-09,203;UBERON:0002204,5.92e-09,167 | |||
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| ||
|short_description=p4@YME1L1 | |short_description=p4@YME1L1 | ||
}} | }} |
Latest revision as of 18:48, 17 September 2015
Short description: | p4@YME1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_YME1L1_5end |
Coexpression cluster: | C675_Eosinophils_CD14_Natural_CD8_Neutrophils_Basophils_CD4 |
Association with transcript: | 89bp_to_ENST00000477432_5end |
EntrezGene: | YME1L1 |
HGNC: | 12843 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.43e-29 | 76 |
bone element | 3.37e-28 | 82 |
hematopoietic system | 2.87e-27 | 98 |
blood island | 2.87e-27 | 98 |
hemolymphoid system | 2.41e-24 | 108 |
skeletal element | 7.55e-24 | 90 |
immune system | 1.95e-23 | 93 |
skeletal system | 3.07e-21 | 100 |
connective tissue | 7.88e-21 | 371 |
lateral plate mesoderm | 1.86e-09 | 203 |
musculoskeletal system | 5.92e-09 | 167 |