FFCP PHASE1:Hg19::chr17:75447464..75447471,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:75447464..75447471,+
|short_description=p34@SEPT9
|description=CAGE_peak_34_at_SEPT9_5end
|association_with_transcript=138bp_to_uc010wtm.1_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10801 | |EntrezGene=10801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |HGNC=7323 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=138bp_to_uc010wtm.1_5end | |||
|cluster_id=chr17:75447464..75447471,+ | |||
|description=CAGE_peak_34_at_SEPT9_5end | |||
|id=chr17:75447464..75447471,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000669;1.30e-09;4!CL:0000047;1.99e-09;2!CL:0002575;2.16e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.76e-13,8;CL:0000669,1.87e-09,4;CL:0002575,2.18e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!4.01e-28!86;UBERON:0001017!9.44e-28!82;UBERON:0000073!5.62e-27!94;UBERON:0001016!5.62e-27!94;UBERON:0002616!1.60e-23!59;UBERON:0001049!4.45e-23!57;UBERON:0005068!4.45e-23!57;UBERON:0006241!4.45e-23!57;UBERON:0007135!4.45e-23!57;UBERON:0000955!6.35e-22!69;UBERON:0006238!6.35e-22!69;UBERON:0002346!2.92e-21!90;UBERON:0003075!1.54e-19!86;UBERON:0007284!1.54e-19!86;UBERON:0001869!1.54e-17!32;UBERON:0001893!2.80e-17!34;UBERON:0002020!7.59e-17!34;UBERON:0003528!7.59e-17!34;UBERON:0002791!1.30e-16!33;UBERON:0002780!2.43e-16!41;UBERON:0001890!2.43e-16!41;UBERON:0006240!2.43e-16!41;UBERON:0000924!4.64e-16!173;UBERON:0006601!4.64e-16!173;UBERON:0000153!8.58e-16!129;UBERON:0007811!8.58e-16!129;UBERON:0003080!1.27e-15!42;UBERON:0000956!1.28e-15!25;UBERON:0000203!1.28e-15!25;UBERON:0004121!1.06e-14!169;UBERON:0000033!2.73e-14!123;UBERON:0002619!7.71e-14!22;UBERON:0003056!4.21e-13!61;UBERON:0001950!2.06e-12!20;UBERON:0007023!2.71e-11!115;UBERON:0003076!7.77e-09!15;UBERON:0003057!7.77e-09!15;UBERON:0004733!2.29e-07!12;UBERON:0002028!2.29e-07!12;UBERON:0007277!2.29e-07!12;UBERON:0000025!3.75e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;3.35e-15;25!UBERON:0000203;3.35e-15;25!UBERON:0002619;1.06e-11;22!UBERON:0003528;1.69e-10;34!UBERON:0002020;1.69e-10;34!UBERON:0002791;3.28e-10;32!UBERON:0001869;3.49e-10;32!UBERON:0001950;3.57e-10;20!UBERON:0000922;5.37e-09;49!UBERON:0001893;5.77e-09;34!UBERON:0001871;1.49e-08;6!UBERON:0001016;4.67e-07;83!UBERON:0002780;8.48e-07;41!UBERON:0001890;8.48e-07;41!UBERON:0000073;8.81e-07;53!UBERON:0002616;8.81e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.79e-15,25;UBERON:0000203,1.79e-15,25;UBERON:0001017,1.10e-13,81;UBERON:0001016,2.56e-13,89;UBERON:0002619,5.84e-12,22;UBERON:0002791,1.06e-11,32;UBERON:0001869,1.06e-11,32;UBERON:0002346,4.55e-11,86;UBERON:0003528,6.65e-11,34;UBERON:0002020,6.65e-11,34;UBERON:0001893,6.65e-11,34;UBERON:0001950,1.97e-10,20;UBERON:0003075,2.40e-10,82;UBERON:0007284,2.40e-10,82;UBERON:0004121,2.58e-10,171;UBERON:0000924,2.58e-10,171;UBERON:0006601,2.58e-10,171;UBERON:0001049,6.16e-10,56;UBERON:0005068,6.16e-10,56;UBERON:0006241,6.16e-10,56;UBERON:0007135,6.16e-10,56;UBERON:0000073,5.04e-09,53;UBERON:0002616,5.04e-09,53;UBERON:0001871,5.54e-09,6;UBERON:0002780,1.03e-08,41;UBERON:0001890,1.03e-08,41;UBERON:0003080,1.03e-08,41;UBERON:0006240,1.03e-08,41;UBERON:0010371,2.36e-08,104;UBERON:0011216,6.04e-08,223;UBERON:0000955,1.95e-07,68;UBERON:0006238,1.95e-07,68;UBERON:0003056,2.05e-07,61;UBERON:0010314,2.59e-07,132 | |||
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| ||
|short_description=p34@SEPT9 | |||
}} | }} |
Latest revision as of 18:47, 17 September 2015
Short description: | p34@SEPT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_SEPT9_5end |
Coexpression cluster: | NA |
Association with transcript: | 138bp_to_uc010wtm.1_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.76e-13 | 8 |
pericyte cell | 1.87e-09 | 4 |
central nervous system pericyte | 2.18e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.79e-15 | 25 |
pallium | 1.79e-15 | 25 |
central nervous system | 1.10e-13 | 81 |
nervous system | 2.56e-13 | 89 |
regional part of cerebral cortex | 5.84e-12 | 22 |
regional part of telencephalon | 1.06e-11 | 32 |
cerebral hemisphere | 1.06e-11 | 32 |
neurectoderm | 4.55e-11 | 86 |
brain grey matter | 6.65e-11 | 34 |
gray matter | 6.65e-11 | 34 |
telencephalon | 6.65e-11 | 34 |
neocortex | 1.97e-10 | 20 |
neural plate | 2.40e-10 | 82 |
presumptive neural plate | 2.40e-10 | 82 |
ectoderm-derived structure | 2.58e-10 | 171 |
ectoderm | 2.58e-10 | 171 |
presumptive ectoderm | 2.58e-10 | 171 |
neural tube | 6.16e-10 | 56 |
neural rod | 6.16e-10 | 56 |
future spinal cord | 6.16e-10 | 56 |
neural keel | 6.16e-10 | 56 |
regional part of nervous system | 5.04e-09 | 53 |
regional part of brain | 5.04e-09 | 53 |
temporal lobe | 5.54e-09 | 6 |
regional part of forebrain | 1.03e-08 | 41 |
forebrain | 1.03e-08 | 41 |
anterior neural tube | 1.03e-08 | 41 |
future forebrain | 1.03e-08 | 41 |
ecto-epithelium | 2.36e-08 | 104 |
organ system subdivision | 6.04e-08 | 223 |
brain | 1.95e-07 | 68 |
future brain | 1.95e-07 | 68 |
pre-chordal neural plate | 2.05e-07 | 61 |
structure with developmental contribution from neural crest | 2.59e-07 | 132 |