FFCP PHASE1:Hg19::chr17:75447443..75447457,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10801 | |EntrezGene=10801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |HGNC=7323 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=117bp_to_uc010wtm.1_5end | |association_with_transcript=117bp_to_uc010wtm.1_5end | ||
|cluster_id=chr17:75447443..75447457,+ | |||
|description=CAGE_peak_12_at_SEPT9_5end | |description=CAGE_peak_12_at_SEPT9_5end | ||
|id=chr17:75447443..75447457,+ | |id=chr17:75447443..75447457,+ | ||
|ontology_enrichment_celltype=CL:0002087!6.74e-07!119;CL:0000133!8.13e-07!59 | |ontology_enrichment_celltype=CL:0002087!6.74e-07!119;CL:0000133!8.13e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,3.47e-09,115;CL:0000738,4.14e-08,136;CL:0002031,5.31e-07,120;CL:0002393,9.79e-07,9;CL:0002397,9.79e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.69e-17!82;UBERON:0000073!2.11e-16!94;UBERON:0001016!2.11e-16!94;UBERON:0005743!1.18e-15!86;UBERON:0002616!1.10e-12!59;UBERON:0000955!1.70e-12!69;UBERON:0006238!1.70e-12!69;UBERON:0001869!4.36e-12!32;UBERON:0001893!8.50e-12!34;UBERON:0001049!1.07e-11!57;UBERON:0005068!1.07e-11!57;UBERON:0006241!1.07e-11!57;UBERON:0007135!1.07e-11!57;UBERON:0002791!2.46e-11!33;UBERON:0000956!3.28e-11!25;UBERON:0000203!3.28e-11!25;UBERON:0002020!7.85e-11!34;UBERON:0003528!7.85e-11!34;UBERON:0002346!5.46e-10!90;UBERON:0002619!1.70e-09!22;UBERON:0002780!2.13e-09!41;UBERON:0001890!2.13e-09!41;UBERON:0006240!2.13e-09!41;UBERON:0003075!2.80e-09!86;UBERON:0007284!2.80e-09!86;UBERON:0000153!8.12e-09!129;UBERON:0007811!8.12e-09!129;UBERON:0003080!9.46e-09!42;UBERON:0001950!1.17e-08!20;UBERON:0000924!2.17e-08!173;UBERON:0006601!2.17e-08!173;UBERON:0004121!8.41e-08!169;UBERON:0000033!2.08e-07!123;UBERON:0003056!2.15e-07!61;UBERON:0007023!2.82e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.56e-11;25!UBERON:0000203;1.56e-11;25!UBERON:0001869;2.57e-11;32!UBERON:0001893;1.46e-10;34!UBERON:0002791;3.13e-10;32!UBERON:0002619;1.63e-09;22!UBERON:0003528;2.83e-09;34!UBERON:0002020;2.83e-09;34!UBERON:0001950;1.20e-08;20!UBERON:0002780;2.56e-07;41!UBERON:0001890;2.56e-07;41!UBERON:0001017;5.75e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.84e-17,89;UBERON:0001017,3.33e-17,81;UBERON:0000955,1.58e-12,68;UBERON:0006238,1.58e-12,68;UBERON:0001869,1.86e-12,32;UBERON:0001893,4.48e-12,34;UBERON:0001049,6.22e-12,56;UBERON:0005068,6.22e-12,56;UBERON:0006241,6.22e-12,56;UBERON:0007135,6.22e-12,56;UBERON:0000956,6.67e-12,25;UBERON:0000203,6.67e-12,25;UBERON:0002791,3.38e-11,32;UBERON:0000073,6.69e-11,53;UBERON:0002616,6.69e-11,53;UBERON:0003528,9.69e-11,34;UBERON:0002020,9.69e-11,34;UBERON:0011216,2.58e-10,223;UBERON:0002619,6.94e-10,22;UBERON:0002780,2.23e-09,41;UBERON:0001890,2.23e-09,41;UBERON:0003080,2.23e-09,41;UBERON:0006240,2.23e-09,41;UBERON:0002346,6.63e-09,86;UBERON:0001950,6.87e-09,20;UBERON:0003075,5.61e-08,82;UBERON:0007284,5.61e-08,82;UBERON:0004121,3.22e-07,171;UBERON:0000924,3.22e-07,171;UBERON:0006601,3.22e-07,171 | |||
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| ||
|short_description=p12@SEPT9 | |short_description=p12@SEPT9 | ||
}} | }} |
Latest revision as of 18:47, 17 September 2015
Short description: | p12@SEPT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SEPT9_5end |
Coexpression cluster: | NA |
Association with transcript: | 117bp_to_uc010wtm.1_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 3.47e-09 | 115 |
leukocyte | 4.14e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 5.31e-07 | 120 |
intermediate monocyte | 9.79e-07 | 9 |
CD14-positive, CD16-positive monocyte | 9.79e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.84e-17 | 89 |
central nervous system | 3.33e-17 | 81 |
brain | 1.58e-12 | 68 |
future brain | 1.58e-12 | 68 |
cerebral hemisphere | 1.86e-12 | 32 |
telencephalon | 4.48e-12 | 34 |
neural tube | 6.22e-12 | 56 |
neural rod | 6.22e-12 | 56 |
future spinal cord | 6.22e-12 | 56 |
neural keel | 6.22e-12 | 56 |
cerebral cortex | 6.67e-12 | 25 |
pallium | 6.67e-12 | 25 |
regional part of telencephalon | 3.38e-11 | 32 |
regional part of nervous system | 6.69e-11 | 53 |
regional part of brain | 6.69e-11 | 53 |
brain grey matter | 9.69e-11 | 34 |
gray matter | 9.69e-11 | 34 |
organ system subdivision | 2.58e-10 | 223 |
regional part of cerebral cortex | 6.94e-10 | 22 |
regional part of forebrain | 2.23e-09 | 41 |
forebrain | 2.23e-09 | 41 |
anterior neural tube | 2.23e-09 | 41 |
future forebrain | 2.23e-09 | 41 |
neurectoderm | 6.63e-09 | 86 |
neocortex | 6.87e-09 | 20 |
neural plate | 5.61e-08 | 82 |
presumptive neural plate | 5.61e-08 | 82 |
ectoderm-derived structure | 3.22e-07 | 171 |
ectoderm | 3.22e-07 | 171 |
presumptive ectoderm | 3.22e-07 | 171 |