FFCP PHASE1:Hg19::chr1:156933510..156933528,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:156933510..156933528,- to FFCP PHASE1:Hg19::chr1:156933510..156933528,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9826 | |EntrezGene=9826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14580 | |HGNC=14580 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000486670_5end | |||
|cluster_id=chr1:156933510..156933528,- | |||
|coexpression_cluster_id=C687 | |||
|description=CAGE_peak_5_at_ARHGEF11_5end | |||
|id=chr1:156933510..156933528,- | |||
|ontology_enrichment_celltype=CL:0000738!1.09e-68!140;CL:0002087!3.65e-65!119;CL:0002031!1.34e-57!124;CL:0000766!2.25e-53!76;CL:0002194!1.23e-51!63;CL:0000576!1.23e-51!63;CL:0000040!1.23e-51!63;CL:0000559!1.23e-51!63;CL:0002009!3.13e-51!65;CL:0000037!1.94e-50!172;CL:0000566!1.94e-50!172;CL:0002057!2.01e-48!42;CL:0002032!2.26e-47!165;CL:0000837!2.26e-47!165;CL:0000988!8.43e-47!182;CL:0000557!1.31e-46!71;CL:0000839!7.12e-46!70;CL:0000860!8.50e-46!45;CL:0000763!6.53e-32!112;CL:0000049!6.53e-32!112;CL:0000084!7.74e-16!25;CL:0000827!7.74e-16!25;CL:0000791!4.44e-15!18;CL:0000789!4.44e-15!18;CL:0002420!4.44e-15!18;CL:0002419!4.44e-15!18;CL:0000790!4.44e-15!18;CL:0000542!1.96e-13!53;CL:0000051!1.96e-13!53;CL:0000838!6.40e-13!52;CL:0000134!1.52e-11!358;CL:0002320!9.15e-11!365;CL:0002393!1.00e-09!9;CL:0002397!1.00e-09!9;CL:0000625!6.14e-09!11;CL:0000219!8.78e-09!390;CL:0000624!4.85e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.59e-53;33!CL:0002057;1.59e-53;33!CL:0000473;2.03e-52;39!CL:0000234;2.03e-52;39!CL:0000576;1.68e-44;48!CL:0000766;9.62e-34;69!CL:0000084;6.56e-22;25!CL:0002087;4.91e-21;104!CL:0000791;7.84e-20;18!CL:0000789;7.84e-20;18!CL:0002419;7.84e-20;18!CL:0000738;2.29e-17;136!CL:0000763;1.33e-14;100!CL:0000235;5.68e-11;6!CL:0000625;9.36e-11;11!CL:0000624;8.36e-10;6!CL:0000988;1.15e-09;177!CL:0000219;2.83e-07;193!CL:0000094;5.29e-07;8!CL:0002393;8.05e-07;6!CL:0002397;8.05e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.39e-78,48;CL:0000234,1.39e-78,48;CL:0002087,6.86e-78,115;CL:0000738,2.42e-76,136;CL:0002194,1.37e-74,59;CL:0000576,1.37e-74,59;CL:0000040,1.37e-74,59;CL:0000559,1.37e-74,59;CL:0000766,1.55e-73,72;CL:0002009,1.27e-71,61;CL:0000860,1.30e-68,42;CL:0002057,1.30e-68,42;CL:0002031,2.08e-67,120;CL:0000839,5.51e-65,66;CL:0000557,8.93e-64,67;CL:0000037,2.51e-57,168;CL:0002032,3.85e-54,161;CL:0000837,3.85e-54,161;CL:0000988,3.23e-53,177;CL:0000763,4.01e-43,108;CL:0000049,4.01e-43,108;CL:0000084,1.22e-21,25;CL:0000827,1.22e-21,25;CL:0000791,1.27e-19,18;CL:0000789,1.27e-19,18;CL:0002420,1.27e-19,18;CL:0002419,1.27e-19,18;CL:0000790,1.27e-19,18;CL:0000134,8.47e-16,354;CL:0002320,4.58e-15,361;CL:0000219,1.65e-12,386;CL:0002393,3.78e-11,9;CL:0002397,3.78e-11,9;CL:0000235,5.85e-11,6;CL:0000625,1.28e-10,11;CL:0000838,1.52e-10,52;CL:0000542,3.10e-10,53;CL:0000051,3.10e-10,53;CL:0000624,9.74e-10,6;CL:0000048,1.88e-09,427;CL:0000723,4.86e-09,433;CL:0000034,1.65e-08,441;CL:0000094,5.49e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.31e-49;42!CL:0000790;7.84e-20;18!CL:0000049;9.86e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.20e-52!102;UBERON:0003061!2.20e-52!102;UBERON:0002193!2.03e-49!112;UBERON:0002371!6.36e-39!80;UBERON:0001474!5.38e-36!86;UBERON:0002405!4.20e-32!115;UBERON:0004765!1.49e-29!101;UBERON:0001434!1.49e-29!101;UBERON:0003081!1.93e-16!216;UBERON:0002204!2.94e-12!167;UBERON:0002384!3.90e-10!375;UBERON:0000178!7.34e-10!15;UBERON:0000179!7.34e-10!15;UBERON:0000463!7.34e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.22e-14;15!UBERON:0000179;1.22e-14;15!UBERON:0000463;1.22e-14;15!UBERON:0002390;4.69e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.48e-71,98;UBERON:0003061,4.48e-71,98;UBERON:0002193,1.15e-64,108;UBERON:0002371,2.59e-54,76;UBERON:0002405,2.19e-50,93;UBERON:0001474,3.72e-49,82;UBERON:0004765,2.38e-43,90;UBERON:0001434,2.09e-37,100;UBERON:0003081,5.84e-25,203;UBERON:0002204,3.25e-16,167;UBERON:0000178,1.39e-14,15;UBERON:0000179,1.39e-14,15;UBERON:0000463,1.39e-14,15;UBERON:0002384,4.52e-14,371;UBERON:0000926,4.32e-10,315;UBERON:0004120,4.32e-10,315;UBERON:0006603,4.32e-10,315 | |||
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|short_description=p5@ARHGEF11 | |||
}} | }} |
Latest revision as of 18:42, 17 September 2015
Short description: | p5@ARHGEF11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARHGEF11_5end |
Coexpression cluster: | C687_CD14_Macrophage_Monocytederived_Dendritic_Endothelial_Pericytes_schwannoma |
Association with transcript: | 29bp_to_ENST00000486670_5end |
EntrezGene: | ARHGEF11 |
HGNC: | 14580 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.48e-71 | 98 |
blood island | 4.48e-71 | 98 |
hemolymphoid system | 1.15e-64 | 108 |
bone marrow | 2.59e-54 | 76 |
immune system | 2.19e-50 | 93 |
bone element | 3.72e-49 | 82 |
skeletal element | 2.38e-43 | 90 |
skeletal system | 2.09e-37 | 100 |
lateral plate mesoderm | 5.84e-25 | 203 |
musculoskeletal system | 3.25e-16 | 167 |
blood | 1.39e-14 | 15 |
haemolymphatic fluid | 1.39e-14 | 15 |
organism substance | 1.39e-14 | 15 |
connective tissue | 4.52e-14 | 371 |
mesoderm | 4.32e-10 | 315 |
mesoderm-derived structure | 4.32e-10 | 315 |
presumptive mesoderm | 4.32e-10 | 315 |