FFCP PHASE1:Hg19::chr13:52027161..52027179,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26512 | |EntrezGene=26512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14879 | |HGNC=14879 | ||
|TSSclassifier=strong | |||
|UniProt=C9J0C6,B4DL13 | |UniProt=C9J0C6,B4DL13 | ||
|association_with_transcript=0bp_to_ENST00000425000,ENST00000463928_5end | |association_with_transcript=0bp_to_ENST00000425000,ENST00000463928_5end | ||
|cluster_id=chr13:52027161..52027179,- | |||
|coexpression_cluster_id=C999 | |||
|description=CAGE_peak_1_at_INTS6_5end | |description=CAGE_peak_1_at_INTS6_5end | ||
|id=chr13:52027161..52027179,- | |id=chr13:52027161..52027179,- | ||
|ontology_enrichment_celltype=CL:0000037!1.65e-28!172;CL:0000566!1.65e-28!172;CL:0000738!1.07e-27!140;CL:0002032!6.78e-26!165;CL:0000837!6.78e-26!165;CL:0000988!9.36e-25!182;CL:0002031!2.21e-24!124;CL:0002087!8.32e-22!119;CL:0000766!3.85e-17!76;CL:0000763!3.10e-16!112;CL:0000049!3.10e-16!112;CL:0000860!1.43e-15!45;CL:0002057!1.04e-14!42;CL:0000557!1.47e-14!71;CL:0000839!4.52e-14!70;CL:0002009!6.83e-13!65;CL:0002194!5.03e-12!63;CL:0000576!5.03e-12!63;CL:0000040!5.03e-12!63;CL:0000559!5.03e-12!63;CL:0000838!1.26e-09!52;CL:0000542!2.67e-09!53;CL:0000051!2.67e-09!53 | |ontology_enrichment_celltype=CL:0000037!1.65e-28!172;CL:0000566!1.65e-28!172;CL:0000738!1.07e-27!140;CL:0002032!6.78e-26!165;CL:0000837!6.78e-26!165;CL:0000988!9.36e-25!182;CL:0002031!2.21e-24!124;CL:0002087!8.32e-22!119;CL:0000766!3.85e-17!76;CL:0000763!3.10e-16!112;CL:0000049!3.10e-16!112;CL:0000860!1.43e-15!45;CL:0002057!1.04e-14!42;CL:0000557!1.47e-14!71;CL:0000839!4.52e-14!70;CL:0002009!6.83e-13!65;CL:0002194!5.03e-12!63;CL:0000576!5.03e-12!63;CL:0000040!5.03e-12!63;CL:0000559!5.03e-12!63;CL:0000838!1.26e-09!52;CL:0000542!2.67e-09!53;CL:0000051!2.67e-09!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.28e-16;33!CL:0002057;5.28e-16;33!CL:0000473;7.66e-10;39!CL:0000234;7.66e-10;39!CL:0000576;1.75e-09;48!CL:0002087;5.77e-08;104!CL:0000766;2.13e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.56e-27,168;CL:0000738,2.28e-26,136;CL:0002032,1.33e-24,161;CL:0000837,1.33e-24,161;CL:0000988,4.49e-24,177;CL:0002031,4.28e-23,120;CL:0002087,1.48e-20,115;CL:0000766,6.29e-16,72;CL:0000763,4.31e-15,108;CL:0000049,4.31e-15,108;CL:0000860,1.04e-14,42;CL:0002057,1.04e-14,42;CL:0000557,2.20e-13,67;CL:0000839,6.63e-13,66;CL:0002009,9.65e-12,61;CL:0000473,3.93e-11,48;CL:0000234,3.93e-11,48;CL:0002194,6.84e-11,59;CL:0000576,6.84e-11,59;CL:0000040,6.84e-11,59;CL:0000559,6.84e-11,59;CL:0000838,1.26e-09,52;CL:0000542,2.67e-09,53;CL:0000051,2.67e-09,53 | |||
|ontology_enrichment_development_v019=CL:0002057;2.15e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.48e-16!102;UBERON:0003061!7.48e-16!102;UBERON:0002193!1.97e-12!112;UBERON:0002371!5.12e-12!80;UBERON:0001474!1.17e-11!86;UBERON:0002405!2.70e-10!115;UBERON:0004765!2.71e-08!101;UBERON:0001434!2.71e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.05e-14,98;UBERON:0003061,1.05e-14,98;UBERON:0002193,2.13e-11,108;UBERON:0002371,6.30e-11,76;UBERON:0001474,1.36e-10,82;UBERON:0004765,8.10e-09,90;UBERON:0002405,1.04e-08,93;UBERON:0001434,6.07e-07,100 | |||
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| ||
|short_description=p1@INTS6 | |short_description=p1@INTS6 | ||
}} | }} |
Latest revision as of 18:39, 17 September 2015
Short description: | p1@INTS6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_INTS6_5end |
Coexpression cluster: | C999_CD14_Eosinophils_Mast_Neutrophils_CD19_CD8_CD4 |
Association with transcript: | 0bp_to_ENST00000425000, ENST00000463928_5end |
EntrezGene: | INTS6 |
HGNC: | 14879 |
UniProt: | C9J0C6B4DL13 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.56e-27 | 168 |
leukocyte | 2.28e-26 | 136 |
hematopoietic oligopotent progenitor cell | 1.33e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.33e-24 | 161 |
hematopoietic cell | 4.49e-24 | 177 |
hematopoietic lineage restricted progenitor cell | 4.28e-23 | 120 |
nongranular leukocyte | 1.48e-20 | 115 |
myeloid leukocyte | 6.29e-16 | 72 |
myeloid cell | 4.31e-15 | 108 |
common myeloid progenitor | 4.31e-15 | 108 |
classical monocyte | 1.04e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.04e-14 | 42 |
granulocyte monocyte progenitor cell | 2.20e-13 | 67 |
myeloid lineage restricted progenitor cell | 6.63e-13 | 66 |
macrophage dendritic cell progenitor | 9.65e-12 | 61 |
defensive cell | 3.93e-11 | 48 |
phagocyte | 3.93e-11 | 48 |
monopoietic cell | 6.84e-11 | 59 |
monocyte | 6.84e-11 | 59 |
monoblast | 6.84e-11 | 59 |
promonocyte | 6.84e-11 | 59 |
lymphoid lineage restricted progenitor cell | 1.26e-09 | 52 |
lymphocyte | 2.67e-09 | 53 |
common lymphoid progenitor | 2.67e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.05e-14 | 98 |
blood island | 1.05e-14 | 98 |
hemolymphoid system | 2.13e-11 | 108 |
bone marrow | 6.30e-11 | 76 |
bone element | 1.36e-10 | 82 |
skeletal element | 8.10e-09 | 90 |
immune system | 1.04e-08 | 93 |
skeletal system | 6.07e-07 | 100 |