FFCP PHASE1:Hg19::chr17:75369400..75369477,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10801 | |EntrezGene=10801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |HGNC=7323 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHD8 | |UniProt=Q9UHD8 | ||
|association_with_transcript=128bp_to_ENST00000423034,NM_001113493,uc002jtv.2_5end | |association_with_transcript=128bp_to_ENST00000423034,NM_001113493,uc002jtv.2_5end | ||
|cluster_id=chr17:75369400..75369477,+ | |||
|description=CAGE_peak_1_at_SEPT9_5end | |description=CAGE_peak_1_at_SEPT9_5end | ||
|id=chr17:75369400..75369477,+ | |id=chr17:75369400..75369477,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.91e-27!180;CL:0000183!2.63e-22!59;CL:0000680!7.24e-21!57;CL:0000056!7.24e-21!57;CL:0000355!7.24e-21!57;CL:0000187!1.05e-20!54;CL:0000393!6.66e-19!60;CL:0000211!6.66e-19!60;CL:0000048!6.28e-17!430;CL:0000192!5.44e-16!42;CL:0000514!5.44e-16!42;CL:0000034!2.95e-15!444;CL:0000723!3.08e-15!436;CL:0000057!6.88e-13!75;CL:0000222!1.52e-11!119;CL:0000359!1.79e-11!32 | |ontology_enrichment_celltype=CL:0000055!4.91e-27!180;CL:0000183!2.63e-22!59;CL:0000680!7.24e-21!57;CL:0000056!7.24e-21!57;CL:0000355!7.24e-21!57;CL:0000187!1.05e-20!54;CL:0000393!6.66e-19!60;CL:0000211!6.66e-19!60;CL:0000048!6.28e-17!430;CL:0000192!5.44e-16!42;CL:0000514!5.44e-16!42;CL:0000034!2.95e-15!444;CL:0000723!3.08e-15!436;CL:0000057!6.88e-13!75;CL:0000222!1.52e-11!119;CL:0000359!1.79e-11!32 | ||
|ontology_enrichment_celltype_v019=CL:0000187;2.54e-12;55!CL:0000192;2.69e-12;43!CL:0000359;4.75e-11;32!CL:0000393;1.51e-10;61!CL:0000211;1.51e-10;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.53e-21,58;CL:0000056,1.53e-21,58;CL:0000355,1.53e-21,58;CL:0000187,2.20e-21,55;CL:0000393,1.50e-19,61;CL:0000211,1.50e-19,61;CL:0000048,6.22e-18,427;CL:0000192,1.22e-16,43;CL:0000514,1.22e-16,43;CL:0000034,4.14e-16,441;CL:0000723,4.28e-16,433;CL:0000057,3.48e-13,76;CL:0000222,3.72e-12,121;CL:0000359,1.68e-11,32 | |||
|ontology_enrichment_development_v019=CL:0000514;2.69e-12;43!CL:0000355;1.49e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.17e-24!83;UBERON:0002329!1.17e-24!83;UBERON:0003077!1.17e-24!83;UBERON:0003059!1.17e-24!83;UBERON:0007282!1.17e-24!83;UBERON:0009618!1.17e-24!83;UBERON:0007285!1.17e-24!83;UBERON:0004290!7.08e-23!70;UBERON:0001134!1.06e-20!61;UBERON:0002036!1.06e-20!61;UBERON:0003082!1.06e-20!61;UBERON:0002385!1.21e-20!63;UBERON:0001015!1.21e-20!63;UBERON:0000383!1.21e-20!63;UBERON:0005256!1.50e-16!143;UBERON:0004535!3.22e-16!110;UBERON:0001009!4.34e-16!113;UBERON:0000486!1.17e-15!82;UBERON:0002049!2.51e-15!79;UBERON:0007798!2.51e-15!79;UBERON:0004872!3.54e-13!84;UBERON:0000055!1.76e-12!69;UBERON:0001981!1.23e-11!60;UBERON:0007500!1.23e-11!60;UBERON:0004537!1.23e-11!60;UBERON:0006965!1.23e-11!60;UBERON:0002204!6.37e-11!167;UBERON:0001637!1.29e-10!42;UBERON:0003509!1.29e-10!42;UBERON:0004572!1.29e-10!42;UBERON:0003914!4.02e-10!118;UBERON:0004573!9.48e-10!33;UBERON:0004571!9.48e-10!33;UBERON:0000490!1.52e-09!138;UBERON:0003081!1.78e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;3.45e-09;31!UBERON:0001015;3.45e-09;31!UBERON:0000383;3.45e-09;31!UBERON:0004573;9.24e-09;33!UBERON:0004571;9.24e-09;33!UBERON:0001637;2.41e-07;42!UBERON:0003509;2.41e-07;42!UBERON:0004572;2.41e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.26e-24,78;UBERON:0007524,7.22e-24,73;UBERON:0002329,1.49e-23,71;UBERON:0003059,1.49e-23,71;UBERON:0007282,1.49e-23,71;UBERON:0004290,1.49e-23,71;UBERON:0009618,1.49e-23,71;UBERON:0003077,2.26e-23,72;UBERON:0007285,2.26e-23,72;UBERON:0001134,2.29e-21,62;UBERON:0002036,2.29e-21,62;UBERON:0003082,2.29e-21,62;UBERON:0002385,2.62e-21,64;UBERON:0001015,2.62e-21,64;UBERON:0000383,2.62e-21,64;UBERON:0000486,2.85e-16,83;UBERON:0004535,5.91e-16,109;UBERON:0001009,7.93e-16,112;UBERON:0000926,1.03e-15,315;UBERON:0004120,1.03e-15,315;UBERON:0006603,1.03e-15,315;UBERON:0005256,2.03e-15,122;UBERON:0002049,4.73e-15,78;UBERON:0007798,4.73e-15,78;UBERON:0003104,7.83e-14,160;UBERON:0009142,7.83e-14,160;UBERON:0002204,3.15e-13,167;UBERON:0004872,6.12e-13,83;UBERON:0000055,3.29e-12,68;UBERON:0000490,6.10e-12,148;UBERON:0007500,2.32e-11,59;UBERON:0001981,2.32e-11,59;UBERON:0004537,2.32e-11,59;UBERON:0006965,2.32e-11,59;UBERON:0001637,1.21e-10,42;UBERON:0003509,1.21e-10,42;UBERON:0004572,1.21e-10,42;UBERON:0003914,6.37e-10,117;UBERON:0004573,8.99e-10,33;UBERON:0004571,8.99e-10,33;UBERON:0003081,4.37e-08,203;UBERON:0000479,1.40e-07,773;UBERON:0000119,4.76e-07,309 | |||
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| ||
|short_description=p1@SEPT9 | |short_description=p1@SEPT9 | ||
}} | }} |
Latest revision as of 18:30, 17 September 2015
Short description: | p1@SEPT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEPT9_5end |
Coexpression cluster: | NA |
Association with transcript: | 128bp_to_ENST00000423034, NM_001113493, uc002jtv.2_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | Q9UHD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.53e-21 | 58 |
myoblast | 1.53e-21 | 58 |
multi-potent skeletal muscle stem cell | 1.53e-21 | 58 |
muscle cell | 2.20e-21 | 55 |
electrically responsive cell | 1.50e-19 | 61 |
electrically active cell | 1.50e-19 | 61 |
multi fate stem cell | 6.22e-18 | 427 |
smooth muscle cell | 1.22e-16 | 43 |
smooth muscle myoblast | 1.22e-16 | 43 |
stem cell | 4.14e-16 | 441 |
somatic stem cell | 4.28e-16 | 433 |
fibroblast | 3.48e-13 | 76 |
mesodermal cell | 3.72e-12 | 121 |
vascular associated smooth muscle cell | 1.68e-11 | 32 |