FFCP PHASE1:Hg19::chr6:30710392..30710433,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10211 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3757 | |||
|TSSclassifier=strong | |||
|UniProt=O75955,Q5ST80 | |||
|association_with_transcript=19bp_to_NM_005803,uc003nrm.2,uc011dmr.1_5end | |||
|cluster_id=chr6:30710392..30710433,- | |||
|description=CAGE_peak_2_at_FLOT1_5end | |||
|id=chr6:30710392..30710433,- | |||
|ontology_enrichment_celltype=CL:0000055!7.82e-17!180;CL:0000183!1.76e-08!59;CL:0000057!6.69e-08!75;CL:0000860!3.83e-07!45;CL:0000187!6.00e-07!54;CL:0000680!6.81e-07!57;CL:0000056!6.81e-07!57;CL:0000355!6.81e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.22e-10;33!CL:0002057;5.22e-10;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.56e-07,76;CL:0000187,2.43e-07,55;CL:0000680,2.81e-07,58;CL:0000056,2.81e-07,58;CL:0000355,2.81e-07,58;CL:0000393,8.79e-07,61;CL:0000211,8.79e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!6.61e-11!511;UBERON:0000468!7.76e-11!659;UBERON:0000481!1.71e-10!347;UBERON:0000467!2.01e-10!625;UBERON:0000480!3.59e-10!626;UBERON:0002050!1.39e-09!605;UBERON:0005423!1.39e-09!605;UBERON:0000923!1.99e-09!604;UBERON:0005291!1.99e-09!604;UBERON:0006598!1.99e-09!604;UBERON:0002532!1.99e-09!604;UBERON:0000922!1.50e-08!612;UBERON:0000926!1.75e-07!448;UBERON:0004120!1.75e-07!448;UBERON:0006603!1.75e-07!448;UBERON:0005256!3.74e-07!143;UBERON:0003104!8.25e-07!238;UBERON:0009142!8.25e-07!238 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,2.80e-08,160;UBERON:0009142,2.80e-08,160;UBERON:0007503,1.15e-07,78;UBERON:0000923,1.63e-07,560;UBERON:0010316,1.63e-07,560;UBERON:0005291,1.63e-07,560;UBERON:0006598,1.63e-07,560;UBERON:0010317,1.63e-07,560;UBERON:0002532,1.63e-07,560;UBERON:0002204,2.30e-07,167;UBERON:0005256,2.93e-07,122;UBERON:0002050,5.21e-07,564;UBERON:0000922,6.20e-07,592;UBERON:0005423,8.67e-07,581 | |||
|phase1_expression=4.72363786103447,7.27941781229343,5.77913056793482,13.009528785907,6.70441641640932,7.85104671690332,5.06599756336621,3.79031924056099,1.82829939739887,10.3208253330634,21.6318362071453,11.1405099786388,13.7158828678796,13.242999766725,14.9128819077562,4.70627602516243,3.61616716814386,2.92124036154949,9.27072317701963,18.4681587115182,29.9881016129052,19.4341927316414,16.8879232407323,20.2574149107869,17.3248842640828,3.74425688164961,4.43343183029707,3.69940672174292,7.47392126012918,2.30297638858328,3.09632246632152,1.83884244895785,3.31326510656075,1.84877005083394,0.542270404062111,0.284338464974843,0.880801318004542,10.5259127621057,9.42558903109666,6.51032612147556,1.56740831967947,2.59114932815184,2.83333124397605,26.3170812191012,18.5159212407517,17.7086364667106,20.4537552477002,21.7918980651568,13.6270803193846,21.2892370318391,17.931249457037,15.1348627128695,19.9952494827239,13.5551783552603,13.5426486594342,22.7773230846552,20.4679612543384,18.2026022400519,24.4867113896722,18.9348125974895,17.2621023965741,27.7075092156842,21.5420750231362,25.9997097824943,24.9579945220582,15.8867862913519,16.1933784738849,22.3611312078501,14.6015217157656,14.7688414399479,19.9781835869012,16.5724936194404,14.2408074348398,2.95757400836718,2.97646019951061,4.19317291016752,4.6054738770063,4.50530678524519,3.53596290733576,1.14005097496499,1.39241674039363,1.82664153764634,0,1.63841583378639,0,0.426730222566507,0.400395987036012,1.14950487990897,0.661044872784862,1.90810750907073,0,1.17447437874188,0.764546456250458,2.64342657158052,1.68152568894461,1.84368859342554,0.590129310341499,0.393010762749165,1.43921049299656,0.167186495390678,2.28145586643513,2.8406868344084,0,0.557052284425868,0.294605907474837,0,0.270803863765016,0.512365278902701,0.260118695119756,5.59088875652499,2.21080014228679,2.31842468588042,0.889719378972363,0.802622484269139,2.09071047609954,0.339928028092699,1.53288197440768,1.37450978193052,1.01207876807801,1.59282707162048,2.60433381542567,4.75226022224187,0.903450714466637,1.02389288923535,1.24930726552346,1.65744076430812,1.64225599384209,1.00803371612366,1.33720097891754,1.44824403882799,41.4471672733735,16.0968206328873,10.2290049474824,16.9876401620746,11.5307719446255,12.1671075927092,10.3387173116643,11.1926020169606,12.1949914141648,9.97782288581538,11.2428525687201,7.40031776562076,5.82872461268068,10.7527488407485,0.324547393654683,0.348259474598534,1.32957960518865,2.62339686735876,2.85997455390064,2.22874500797739,7.15544666520138,5.16140757063675,9.37279354340505,9.04492707078415,7.1314904155684,6.60283300656162,7.10582886225156,8.78616981175718,9.60568909254118,4.68608857870538,6.44526907374635,6.84244895146661,10.4946684745713,1.47065232138347,3.24056779152704,5.09008451219255,5.61323431565425,6.98191178996598,10.7321646226118,4.74632829784064,5.31285057398181,110.695550646293,73.6782501881818,9.15797509499322,9.93943903390637,16.0820749814016,11.6520079115633,16.0628507619336,19.5067610209096,6.72813120170769,6.4049397437823,5.67335361359468,11.2035972743916,12.3933818304113,10.9519475086017,16.6493170409425,16.70910180992,29.2901789792246,5.30672130611545,5.13424639390004,10.0130615969707,8.45528390235107,8.25552016277471,9.83155646915739,11.0243252477642,15.1086210293475,12.6057453034434,15.4440371446667,17.5559519787775,12.7422590671324,35.2122889489957,6.06010010234638,8.63317787116553,10.2513722729148,17.1201272143527,25.4384870513186,15.0238058906597,10.889489583362,14.5305604907978,12.1727711626583,7.62954844174423,15.3046459003045,10.5113579823208,6.44101350114073,8.56137539125313,15.5274225661965,13.3488697070842,14.3887251319145,9.11293996558764,9.86040946594752,16.6854508482809,17.2286087969265,23.0602405542263,1.54608682530637,0.818238361772504,2.86804595389004,2.31750041646231,1.32529768321485,1.74290914304278,2.59152637538426,2.27088765788066,1.09493207722749,7.8224766164908,16.724264393015,20.7202382028721,16.7172454091512,8.66255378003503,16.3263384054985,15.3412067971073,18.0758272412612,16.7646838553239,15.9051994187456,18.2698376715544,14.6966125894579,14.5203884192756,20.7763464751051,8.11971000087113,22.4386838085513,13.9935163852676,23.5213938216867,7.60530208930985,13.7595810334868,7.08947888017685,1.32438929824395,4.30459534900897,10.9803398591056,2.19500570817251,1.1240175325762,2.81481122752566,4.81459914824354,37.4679551106873,29.1181739878282,11.5465073620219,10.4337364477569,4.93116515790451,4.47535988059329,0,3.61482889245737,2.37061319387782,0.858486162094873,9.3562462313211,5.14809383306323,10.8500748470772,0,1.51183915378974,1.55952606966625,3.85101647622248,2.3250715081117,8.81780162079986,7.8826118063351,10.7419089496136,6.42717158176393,8.79131715843465,8.8369703398466,9.65167993240969,11.0776643411901,17.582617081507,13.6857956818164,10.3855767630357,16.8192112392594,13.4338423336372,14.8013031335876,20.4901232351642,12.4675085895615,7.36848779819333,10.7296933755565,8.45302752556,15.1584726453376,19.7614130131596,12.8603687131071,14.1849132023278,20.2480856052236,12.582063441917,22.7901074264406,23.0507294298615,11.7265026345745,14.2156779497018,14.2551337128017,7.23454504943007,2.61460037580088,9.79735313584159,2.43247561282381,5.52482800575339,0,10.3038687861381,20.6751484501405,11.4109524032575,6.80472141337622,15.6162005138291,7.52056045607561,8.51847094350807,1.18218456121156,1.50939302401662,2.31017465303547,6.09827098133912,10.4111883086097,16.2390650683316,11.8936548387388,12.7587750330633,32.956309053676,26.9245313283622,41.0271358301675,14.7229790062968,20.0068208423871,18.446021611582,14.1420185840949,17.3076119133247,17.3472656537328,16.0483738540017,6.62081419400982,9.09630016223939,10.3473071292505,21.9194447516694,15.3026409889614,20.8520674723399,21.7339284783642,34.3143423810856,2.48121631347465,7.11856862701436,3.73546452312055,21.5220575726844,11.6504807657348,25.4007846396931,6.69891081110698,12.4304198363331,14.0330047216537,7.68834895534206,7.16390148693385,6.91671860917512,19.2943486378488,8.94416224055402,7.81271591377759,9.77313156564329,9.34657972530518,16.1532426059343,3.98836183652353,2.40607764363942,0.920809889358963,21.011044014123,15.4777492805709,17.7017960195223,11.2799903226853,5.08301224889137,18.0400446910677,10.2297457257282,3.37765212457202,14.7853399292166,8.84487267437881,12.7390390500262,18.5072703228347,20.0500363782451,29.5996966574364,6.37190682612596,5.81753206250107,7.83561641527624,6.79705617602397,8.62736988382172,12.0531558804703,21.9769812618803,13.3405141812364,5.66725564062472,7.50869611510416,5.85817449436175,1.14853107599234,2.60024098414608,9.64103579064957,12.7605348145601,9.85911149533724,10.8987609055552,10.3377429363398,9.88266252788117,10.8762520435671,10.3976485447643,8.814171529027,0.495854746082934,1.34533047155574,1.91419068741876,2.12431339796655,9.29691098594571,7.55549632393536,8.3644472419272,12.6293767872196,12.7753447276085,9.5692629128258,9.08088673609208,22.0412325582666,15.2584931437464,14.8698329617801,12.3909626050486,23.5425968006427,23.9645833298995,18.4557883797043,10.9892809627892,10.9722199125822,13.7268514868027,13.901863476791,15.7702335627186,20.6063417524911,5.89761838734574,28.2827568671962,4.87426979262569,12.6780176108107,13.7864910522066,12.8678943077879,23.731704490251,10.4759415273764,32.5085097868198,21.4840933774344,14.4693883566672,12.462000288886,5.88440093191842,9.60452844109225,21.6905613949826,14.6279579248133,15.42509943906,7.49009208110625,24.1237523568007,15.6219650120271,16.4647446479951,25.4247026423029,31.8440595422934,2.98288549449087,5.3624182042863,4.3556393944529,6.11934705049064,1.29151611801369,10.1082885400575,8.86860307073351,3.67557440331135,5.58192370155386,4.58782324285425,11.9625909306574,4.52640373369799,5.34770955012053,8.43015304550532,5.94034580961926,7.9312517629427,8.86639790358027,13.474717973687,24.2589813821221,0.185803175125719,1.15415370381156,1.28055318027145,4.78278818186467,1.79621434289535,3.25559129225023,1.48171507906718,0.649243880549111,0.561594356226918,0,0.156679895773023,2.50634477090067,1.52362600021443,0.321176150207399,0,1.27753871307098,0.343505344755765,0.307240764308458,0,0.333698283423817,2.14926904942244,1.11362469558097,4.92349595790849,1.35227839237992,0,5.63948020351398,23.2054270106193,9.23001529412932,0.242721043499027,5.01495229248653,5.68272293612826,5.96861211844225,8.01804638248124,7.06469614828234,2.98244294329889,9.84685914873589,25.4896934502455,15.4915641773154,11.4007720389116,7.37217556528958,9.66993704359017,1.76352923497993,10.2268682502155,1.47701766553283,7.15391051622157,7.3692047940808,8.23497403507802,1.02314474045374,9.56841034678256,4.7896618469388,15.5591786202492,14.5399911914283,8.53466503089032,17.9652418201075,3.38556089410803,19.3286599991593,14.4999915086959,31.2931982785124,7.88186315907576,12.0557717701648,1.37897349296586,3.79085997398231,6.59774980746511,3.54296554325536,8.80354001965478,3.05163472634166,5.52896299656123,6.2064999980245,7.23971810608109,7.08100012873436,7.80772967960178,7.9258766258911,22.9023532252472,0,0.448788222048861,1.73835795075213,4.46601623624687,7.51100265895271,2.13213910407454,3.06579894587209,2.5116841023204,12.4658761425117,3.83512623049207,5.09762589226123,4.02771808742022,2.84630599086278,9.21832158086196,5.90794580678476,31.1774663583972,3.25112064298064,0.649165919226273,26.8720721391196,9.19958670834727,14.664723478407,2.96521128680622,3.08909847366257,3.86361213170185,4.31367251076333,5.61804353109152,3.98249557733077,1.094728735294,4.69595085437015,8.25453290415915,6.70793484843964,8.46935012340647,8.26396456402323,7.39282981653309,1.20258735531594,0.829505531177977,23.9275394174587,26.1483645141644,25.4285663909852,34.6470046341581,8.82289592692358,5.26963757449927,1.56203764501618,33.5133999157172,5.83296684088697,7.5132467344073,16.6826451497468,9.38536413504126,14.6909527343233,16.0125141253758,10.4748137807493,5.91316048833052,8.3612874088797,4.65942543798953,12.9164497606943,6.64763357536726,7.03984977845291,14.9896993870368,12.1668207001431,11.7887669653457,26.0803655048932,0.916292769327325,2.74551996579143,7.20273989940748,33.2996795315359,5.42096279618629,10.6005280737419,10.1464760922963,27.7435151970795,17.3370353940911,3.00210144354895,6.02383667124769,0,48.9932603218751,0,9.21631924198439,8.24977526442061,14.3574604915363,8.38651802095763,6.43839072204856,7.36465809558179,7.9276497534337,2.52209918479682,1.16495949527454,7.09048640765013,7.08776382078031,7.41438982396034,23.4257406005102,2.37085329784197,7.15706720828373,8.03600096058296,1.92903778158023,3.30094647833361,4.98528405635022,1.799791132412,4.6428117273477,8.3834388188074,22.1386893815516,11.5056332656829,7.44855151516973,10.3488329789018,16.3151478792889,20.7268413105001,7.86164859010704,14.5660233480395,8.39086174260675,8.14499402630569,22.469758771233,16.9825427256893,5.98650957812437,21.8366105193242,9.88250526355446,14.8438839891365,9.23279072171919,7.95041333473328,9.82550468347784,8.33065390978947,8.04108138056348,32.4214910265669,12.600914682988,5.34494637338864,11.1844544943743,14.3888146325466,1.38328142328561,0.243585196761792,8.29843635101236,4.35214242695579,1.2534494701135,2.14441903734423,2.29510841496863,3.45519011750515,5.31640907980192,9.51804866235313,10.3908472486395,11.4681839138014,8.76339507141133,5.02980863825206,2.35192679391592,29.7453370949814,11.3736838156236,4.28198000317451,14.5864808212866,2.34167452903441,0.579684114443301,12.5374034424974,16.1262183794585,9.43169964554443,13.0688073639811,11.0689876771133,2.66943366478961,9.84012294106771,12.8546285198753,9.94798083729795,6.65348174953353,3.82312241192886,0.899606224327209,7.29735897318419,17.8323669371568,8.24109315129784,6.78268580355254,12.7718967647636,8.3777146677135,7.32367319768391,4.36436782086143,13.9633724155235,3.71227007902795,11.9428766609585,19.6013604684945,14.7660153228601,16.1639754607641,11.3566408405786,5.9712147426264,5.57548137574807,10.9617602625389,15.1892970093222,5.78806185809585,23.005250223608,10.2080639416448,27.7921302444875,14.0341791730373,6.89087669188936,13.1181546024222,10.3054888798374,5.12483037175893,7.25403717635517,16.712297589756,9.67809053062115,6.43039019169982,7.70616073817506,9.9774890496065,26.208787907713,47.4341713894678,14.157912265028,0.999936979274649,0.106691729694141,3.2720846135555,15.3229307463046,15.2807938709028,4.47614424702222,3.11038630016486,0.639471856518258,2.69562028491704,11.3231478136245,2.62103131660833,1.3578602396322,5.10179808244039,6.07285244869111,1.11728983594649,8.90412181829572,0.788617450012533,7.20513673456923,13.0490099165553,22.6621653241368,7.7717362366716,5.6678630530234,11.1743701340006,10.87116730476,10.0828678488687,8.99044282034832,11.949197776757,0,19.6295437002051,13.4485484616424,13.7571448891259,12.7078232765372,20.9760152506942,7.59395918666111,7.16098399618589,8.49876710346607,7.26138247332672,3.90757005616546,0.785720083444267,9.49877121558561,11.8284868973636,9.45526184657525,7.02970288752463,8.68084545304973,7.4196497926871,10.9394961803644,2.19303106742873,2.97726707033577,8.96943346234065,13.2872924745179,1.60710550763486,2.35398605553177,1.21393120847326,3.41493287026946,3.45939243634291,0.921871900446234,15.0909448304928,8.97200475294179,9.01086997811032,10.8738333613251,15.1274706573214,9.4976642349122,8.64135744538011,8.12789273609988,28.3079203357944,7.34153810143313,5.25526856675755,5.21778772489591,2.3702041759909,10.229245432395,2.78173235684127,20.8444954829866,6.83813341738022,2.90221411059715,7.60385627995501,2.58136415292167,6.50826004018109,4.77195066651283,6.77419280305486,11.4553434272025,13.6490809692301,13.3775451456841,1.4541206133713,19.0411453213571,3.53561982448581,2.58971534875158,4.61982630853112,3.4794432940146,7.28566489588709,4.91272873270422,4.17796627838873,0.83244063544298,1.35535298446752,0.769583617218004,0.603851374266694,7.33154502025474,8.30526329915038,9.40634592723046,9.31563622664841,6.12759022464227,9.42280642151737,5.94092800654172,6.7624916413344,11.8948980281472,6.4848903406099,5.35000470180691,1.39917618294901,7.67781936004328,14.8215846120591,0.481448200135009,8.76403665895821,2.2936464170227,5.0168854103008,2.52434499509095,9.11085968558257,6.98161104544604,7.40637576721561,15.2517957448368,23.5709570602023,21.1987015440657,1.38783067318587,0.98339014767326,8.2354025657434,1.63182127587171,1.3360870263278,1.65410819162721,1.25353769646188,6.28963195211387,2.14371304124943,4.97501663675268,5.99911375998992,6.82348742083139,6.90386851244847,2.58355639344024,4.65560357218934,20.9686583025747,9.54707374172474,6.2656328577048,8.27323642008453,7.52913262387618,5.388164241167,12.9099969706817,5.98788641782824,4.23296996777067,11.3130986630378,19.307228228694,28.923715078321,4.69281884806909,8.55690109280065,12.6137815277879,9.32059483859718,6.44076139491284,2.8851164307291 | |||
|short_description=p2@FLOT1 | |||
}} |
Latest revision as of 18:25, 17 September 2015
Short description: | p2@FLOT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FLOT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_NM_005803, uc003nrm.2, uc011dmr.1_5end |
EntrezGene: | FLOT1 |
HGNC: | 3757 |
UniProt: | O75955Q5ST80 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.56e-07 | 76 |
muscle cell | 2.43e-07 | 55 |
muscle precursor cell | 2.81e-07 | 58 |
myoblast | 2.81e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.81e-07 | 58 |
electrically responsive cell | 8.79e-07 | 61 |
electrically active cell | 8.79e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 2.80e-08 | 160 |
entire embryonic mesenchyme | 2.80e-08 | 160 |
epithelial vesicle | 1.15e-07 | 78 |
germ layer | 1.63e-07 | 560 |
germ layer / neural crest | 1.63e-07 | 560 |
embryonic tissue | 1.63e-07 | 560 |
presumptive structure | 1.63e-07 | 560 |
germ layer / neural crest derived structure | 1.63e-07 | 560 |
epiblast (generic) | 1.63e-07 | 560 |
musculoskeletal system | 2.30e-07 | 167 |
trunk mesenchyme | 2.93e-07 | 122 |
embryonic structure | 5.21e-07 | 564 |
embryo | 6.20e-07 | 592 |
developing anatomical structure | 8.67e-07 | 581 |