FFCP PHASE2:Hg19::chr2:56150883..56150896,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2202 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:3218 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=3218 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B4DW75 | ||
|association_with_transcript=14bp_to_ENST00000424836,ENST00000452161_5end | |association_with_transcript=14bp_to_ENST00000424836,ENST00000452161_5end | ||
|cluster_id=chr2:56150883..56150896,- | |cluster_id=chr2:56150883..56150896,- |
Latest revision as of 18:22, 17 September 2015
Short description: | p2@EFEMP1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EFEMP1_5end |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | 14bp_to_ENST00000424836, ENST00000452161_5end |
EntrezGene: | EFEMP1 |
HGNC: | 3218 |
UniProt: | B4DW75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@EFEMP1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mesodermal cell | 1.81e-29 | 121 |
lining cell | 8.59e-19 | 58 |
barrier cell | 8.59e-19 | 58 |
endothelial cell of vascular tree | 6.02e-17 | 24 |
meso-epithelial cell | 2.91e-14 | 45 |
endothelial cell | 1.19e-13 | 36 |
embryonic cell | 3.58e-13 | 250 |
blood vessel endothelial cell | 7.16e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.16e-13 | 18 |
muscle cell | 4.26e-12 | 55 |
Showing 1 to 10 of 22 entries
Ontology term | p-value | n |
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splanchnic layer of lateral plate mesoderm | 9.25e-32 | 83 |
vasculature | 5.98e-31 | 78 |
vascular system | 5.98e-31 | 78 |
vessel | 3.00e-28 | 68 |
epithelial tube open at both ends | 6.70e-26 | 59 |
blood vessel | 6.70e-26 | 59 |
blood vasculature | 6.70e-26 | 59 |
vascular cord | 6.70e-26 | 59 |
cardiovascular system | 1.65e-25 | 109 |
circulatory system | 2.19e-25 | 112 |
Showing 1 to 10 of 69 entries