FFCP PHASE1:Hg19::chr1:35497509..35497574,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:35497509..35497574,- to FFCP PHASE1:Hg19::chr1:35497509..35497574,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9204 | |EntrezGene=9204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13050 | |HGNC=13050 | ||
|TSSclassifier=strong | |||
|UniProt=O95789 | |UniProt=O95789 | ||
|association_with_transcript=0bp_to_ENST00000357182,ENST00000373340,ENST00000471566,NM_007167,uc001byh.2,uc001byk.2,uc009vup.2,uc009vuq.1,uc010oht.1_5end | |||
|cluster_id=chr1:35497509..35497574,- | |||
|description=CAGE_peak_2_at_ZMYM6_5end | |||
|id=chr1:35497509..35497574,- | |||
|ontology_enrichment_celltype=CL:0000557!1.10e-17!71;CL:0000839!3.69e-16!70;CL:0002009!9.07e-16!65;CL:0002194!1.10e-14!63;CL:0000576!1.10e-14!63;CL:0000040!1.10e-14!63;CL:0000559!1.10e-14!63;CL:0002057!2.38e-13!42;CL:0000766!1.39e-12!76;CL:0000763!3.00e-12!112;CL:0000049!3.00e-12!112;CL:0000860!2.77e-11!45;CL:0002031!1.22e-08!124;CL:0000738!2.48e-08!140;CL:0000037!2.97e-08!172;CL:0000566!2.97e-08!172;CL:0002087!2.36e-07!119;CL:0002032!2.87e-07!165;CL:0000837!2.87e-07!165;CL:0000988!7.12e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.05e-14;33!CL:0002057;3.05e-14;33!CL:0000473;1.40e-11;39!CL:0000234;1.40e-11;39!CL:0000576;3.51e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.59e-19,67;CL:0000839,6.82e-18,66;CL:0002009,1.43e-17,61;CL:0002194,1.96e-16,59;CL:0000576,1.96e-16,59;CL:0000040,1.96e-16,59;CL:0000559,1.96e-16,59;CL:0000766,6.42e-14,72;CL:0000860,2.38e-13,42;CL:0002057,2.38e-13,42;CL:0000763,3.14e-13,108;CL:0000049,3.14e-13,108;CL:0000473,8.79e-13,48;CL:0000234,8.79e-13,48;CL:0002031,2.40e-09,120;CL:0000738,5.72e-09,136;CL:0000037,8.29e-09,168;CL:0002087,5.36e-08,115;CL:0002032,8.68e-08,161;CL:0000837,8.68e-08,161;CL:0000988,1.34e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;9.78e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.79e-19!57;UBERON:0005068!1.79e-19!57;UBERON:0006241!1.79e-19!57;UBERON:0007135!1.79e-19!57;UBERON:0003080!9.47e-19!42;UBERON:0002780!1.39e-18!41;UBERON:0001890!1.39e-18!41;UBERON:0006240!1.39e-18!41;UBERON:0007023!1.60e-17!115;UBERON:0002616!2.29e-17!59;UBERON:0001017!6.52e-16!82;UBERON:0005743!1.16e-15!86;UBERON:0000073!1.38e-15!94;UBERON:0001016!1.38e-15!94;UBERON:0001893!1.74e-15!34;UBERON:0001474!3.28e-15!86;UBERON:0002371!4.57e-15!80;UBERON:0002791!7.43e-15!33;UBERON:0002020!8.98e-15!34;UBERON:0003528!8.98e-15!34;UBERON:0001869!1.19e-14!32;UBERON:0002346!3.90e-14!90;UBERON:0003075!5.42e-14!86;UBERON:0007284!5.42e-14!86;UBERON:0000955!7.69e-14!69;UBERON:0006238!7.69e-14!69;UBERON:0004765!1.12e-13!101;UBERON:0001434!1.12e-13!101;UBERON:0002390!4.77e-13!102;UBERON:0003061!4.77e-13!102;UBERON:0003056!2.77e-11!61;UBERON:0002193!4.19e-11!112;UBERON:0000956!4.85e-11!25;UBERON:0000203!4.85e-11!25;UBERON:0002619!9.44e-11!22;UBERON:0001950!8.40e-10!20;UBERON:0000033!1.30e-09!123;UBERON:0000924!3.16e-09!173;UBERON:0006601!3.16e-09!173;UBERON:0000153!4.33e-09!129;UBERON:0007811!4.33e-09!129;UBERON:0000062!5.09e-09!511;UBERON:0004121!5.56e-09!169;UBERON:0002405!5.29e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.63e-13;34!UBERON:0002780;2.02e-13;41!UBERON:0001890;2.02e-13;41!UBERON:0001869;3.86e-13;32!UBERON:0003528;4.74e-13;34!UBERON:0002020;4.74e-13;34!UBERON:0002791;6.11e-13;32!UBERON:0000073;1.31e-11;53!UBERON:0002616;1.31e-11;53!UBERON:0000956;4.86e-11;25!UBERON:0000203;4.86e-11;25!UBERON:0002619;1.03e-10;22!UBERON:0001950;9.89e-10;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.81e-19,56;UBERON:0005068,2.81e-19,56;UBERON:0006241,2.81e-19,56;UBERON:0007135,2.81e-19,56;UBERON:0000073,1.00e-18,53;UBERON:0002616,1.00e-18,53;UBERON:0002780,1.39e-18,41;UBERON:0001890,1.39e-18,41;UBERON:0003080,1.39e-18,41;UBERON:0006240,1.39e-18,41;UBERON:0007023,4.63e-17,114;UBERON:0001474,1.26e-16,82;UBERON:0002371,1.50e-16,76;UBERON:0001017,1.06e-15,81;UBERON:0001016,1.42e-15,89;UBERON:0001893,1.73e-15,34;UBERON:0003528,8.97e-15,34;UBERON:0002020,8.97e-15,34;UBERON:0001869,1.19e-14,32;UBERON:0002791,2.75e-14,32;UBERON:0002390,3.74e-14,98;UBERON:0003061,3.74e-14,98;UBERON:0004765,1.01e-13,90;UBERON:0000955,1.24e-13,68;UBERON:0006238,1.24e-13,68;UBERON:0002346,1.63e-13,86;UBERON:0001434,2.00e-13,100;UBERON:0003075,2.25e-13,82;UBERON:0007284,2.25e-13,82;UBERON:0002405,8.81e-13,93;UBERON:0002193,5.10e-12,108;UBERON:0003056,1.94e-11,61;UBERON:0000956,4.84e-11,25;UBERON:0000203,4.84e-11,25;UBERON:0010371,6.95e-11,104;UBERON:0002619,9.43e-11,22;UBERON:0001950,8.40e-10,20;UBERON:0010314,5.00e-09,132;UBERON:0004121,6.38e-09,171;UBERON:0000924,6.38e-09,171;UBERON:0006601,6.38e-09,171 | |||
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| ||
|short_description=p2@ZMYM6 | |||
}} | }} |
Latest revision as of 18:20, 17 September 2015
Short description: | p2@ZMYM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZMYM6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000357182, ENST00000373340, ENST00000471566, NM_007167, uc001byh.2, uc001byk.2, uc009vup.2, uc009vuq.1, uc010oht.1_5end |
EntrezGene: | ZMYM6 |
HGNC: | 13050 |
UniProt: | O95789 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.59e-19 | 67 |
myeloid lineage restricted progenitor cell | 6.82e-18 | 66 |
macrophage dendritic cell progenitor | 1.43e-17 | 61 |
monopoietic cell | 1.96e-16 | 59 |
monocyte | 1.96e-16 | 59 |
monoblast | 1.96e-16 | 59 |
promonocyte | 1.96e-16 | 59 |
myeloid leukocyte | 6.42e-14 | 72 |
classical monocyte | 2.38e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.38e-13 | 42 |
myeloid cell | 3.14e-13 | 108 |
common myeloid progenitor | 3.14e-13 | 108 |
defensive cell | 8.79e-13 | 48 |
phagocyte | 8.79e-13 | 48 |
hematopoietic lineage restricted progenitor cell | 2.40e-09 | 120 |
leukocyte | 5.72e-09 | 136 |
hematopoietic stem cell | 8.29e-09 | 168 |
nongranular leukocyte | 5.36e-08 | 115 |
hematopoietic oligopotent progenitor cell | 8.68e-08 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-08 | 161 |
hematopoietic cell | 1.34e-07 | 177 |