FFCP PHASE1:Hg19::chr1:35497283..35497366,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:35497283..35497366,-
|short_description=p1@ZMYM6
|description=CAGE_peak_1_at_ZMYM6_5end
|association_with_transcript=0bp_to_ENST00000373333,ENST00000487874...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9204 | |EntrezGene=9204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13050 | |HGNC=13050 | ||
|TSSclassifier=strong | |||
|UniProt=O95789 | |UniProt=O95789 | ||
|association_with_transcript=0bp_to_ENST00000373333,ENST00000487874,ENST00000493328,uc001byf.1,uc001byi.2,uc001byj.2,uc009vur.1_5end | |||
|cluster_id=chr1:35497283..35497366,- | |||
|description=CAGE_peak_1_at_ZMYM6_5end | |||
|id=chr1:35497283..35497366,- | |||
|ontology_enrichment_celltype=CL:0000738!4.17e-42!140;CL:0000037!8.10e-42!172;CL:0000566!8.10e-42!172;CL:0002032!9.12e-39!165;CL:0000837!9.12e-39!165;CL:0000988!5.99e-37!182;CL:0002031!9.91e-37!124;CL:0002087!7.23e-34!119;CL:0000763!4.75e-22!112;CL:0000049!4.75e-22!112;CL:0000766!1.28e-20!76;CL:0000557!4.32e-20!71;CL:0000839!8.10e-20!70;CL:0002009!2.57e-17!65;CL:0002194!1.34e-16!63;CL:0000576!1.34e-16!63;CL:0000040!1.34e-16!63;CL:0000559!1.34e-16!63;CL:0002057!6.01e-16!42;CL:0000838!1.57e-15!52;CL:0000542!1.85e-15!53;CL:0000051!1.85e-15!53;CL:0000860!9.20e-14!45;CL:0000134!5.66e-11!358;CL:0002320!6.10e-10!365;CL:0000791!2.04e-09!18;CL:0000789!2.04e-09!18;CL:0002420!2.04e-09!18;CL:0002419!2.04e-09!18;CL:0000790!2.04e-09!18;CL:0000945!2.68e-08!24;CL:0000826!2.68e-08!24;CL:0000236!5.60e-08!14;CL:0000084!2.66e-07!25;CL:0000827!2.66e-07!25;CL:0000451!3.15e-07!10;CL:0000625!3.43e-07!11;CL:0002393!7.90e-07!9;CL:0002397!7.90e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.56e-11;48!CL:0002087;1.00e-10;104!CL:0000766;5.75e-10;69!CL:0000860;6.93e-10;33!CL:0002057;6.93e-10;33!CL:0000738;1.44e-09;136!CL:0000542;1.55e-09;53!CL:0000791;1.74e-09;18!CL:0000789;1.74e-09;18!CL:0002419;1.74e-09;18!CL:0000473;2.49e-09;39!CL:0000234;2.49e-09;39!CL:0000945;3.10e-08;24!CL:0000236;3.70e-08;13!CL:0000625;2.94e-07;11!CL:0000451;3.19e-07;10!CL:0000084;3.54e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.25e-45,136;CL:0000037,3.03e-44,168;CL:0002032,3.85e-41,161;CL:0000837,3.85e-41,161;CL:0000988,5.09e-40,177;CL:0002031,1.56e-39,120;CL:0002087,1.35e-36,115;CL:0000763,3.66e-24,108;CL:0000049,3.66e-24,108;CL:0000766,2.81e-23,72;CL:0000557,7.83e-23,67;CL:0000839,1.46e-22,66;CL:0002009,6.08e-20,61;CL:0002194,3.31e-19,59;CL:0000576,3.31e-19,59;CL:0000040,3.31e-19,59;CL:0000559,3.31e-19,59;CL:0000473,2.38e-16,48;CL:0000234,2.38e-16,48;CL:0000860,6.01e-16,42;CL:0002057,6.01e-16,42;CL:0000838,1.57e-15,52;CL:0000542,1.85e-15,53;CL:0000051,1.85e-15,53;CL:0000134,7.75e-12,354;CL:0002320,9.44e-11,361;CL:0000791,2.04e-09,18;CL:0000789,2.04e-09,18;CL:0002420,2.04e-09,18;CL:0002419,2.04e-09,18;CL:0000790,2.04e-09,18;CL:0000945,2.68e-08,24;CL:0000826,2.68e-08,24;CL:0000236,5.60e-08,14;CL:0000084,2.66e-07,25;CL:0000827,2.66e-07,25;CL:0000451,3.15e-07,10;CL:0000625,3.43e-07,11;CL:0000219,5.12e-07,386;CL:0002393,7.90e-07,9;CL:0002397,7.90e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.33e-11;42!CL:0000051;1.55e-09;53!CL:0000790;1.74e-09;18!CL:0000049;3.05e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.63e-25!102;UBERON:0003061!2.63e-25!102;UBERON:0002193!3.43e-23!112;UBERON:0002371!2.60e-17!80;UBERON:0001474!3.28e-15!86;UBERON:0004765!3.03e-13!101;UBERON:0001434!3.03e-13!101;UBERON:0007023!1.08e-11!115;UBERON:0002405!3.74e-11!115;UBERON:0002384!5.29e-09!375;UBERON:0000178!6.80e-07!15;UBERON:0000179!6.80e-07!15;UBERON:0000463!6.80e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.17e-07;15!UBERON:0000179;6.17e-07;15!UBERON:0000463;6.17e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.52e-28,98;UBERON:0003061,8.52e-28,98;UBERON:0002193,2.23e-25,108;UBERON:0002405,1.04e-19,93;UBERON:0002371,1.42e-19,76;UBERON:0001474,3.59e-17,82;UBERON:0004765,1.70e-16,90;UBERON:0001434,6.14e-14,100;UBERON:0007023,1.47e-11,114;UBERON:0002384,9.23e-10,371;UBERON:0000178,6.80e-07,15;UBERON:0000179,6.80e-07,15;UBERON:0000463,6.80e-07,15 | |||
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| ||
|short_description=p1@ZMYM6 | |||
}} | }} |
Latest revision as of 18:19, 17 September 2015
Short description: | p1@ZMYM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZMYM6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000373333, ENST00000487874, ENST00000493328, uc001byf.1, uc001byi.2, uc001byj.2, uc009vur.1_5end |
EntrezGene: | ZMYM6 |
HGNC: | 13050 |
UniProt: | O95789 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.52e-28 | 98 |
blood island | 8.52e-28 | 98 |
hemolymphoid system | 2.23e-25 | 108 |
immune system | 1.04e-19 | 93 |
bone marrow | 1.42e-19 | 76 |
bone element | 3.59e-17 | 82 |
skeletal element | 1.70e-16 | 90 |
skeletal system | 6.14e-14 | 100 |
adult organism | 1.47e-11 | 114 |
connective tissue | 9.23e-10 | 371 |
blood | 6.80e-07 | 15 |
haemolymphatic fluid | 6.80e-07 | 15 |
organism substance | 6.80e-07 | 15 |