FFCP PHASE1:Hg19::chr1:35497254..35497279,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:35497254..35497279,-
|short_description=p3@ZMYM6
|description=CAGE_peak_3_at_ZMYM6_5end
|association_with_transcript=11bp_to_ENST00000373333,uc001byf.1,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9204 | |EntrezGene=9204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13050 | |HGNC=13050 | ||
|TSSclassifier=strong | |||
|UniProt=O95789 | |UniProt=O95789 | ||
|association_with_transcript=11bp_to_ENST00000373333,uc001byf.1,uc001byi.2,uc001byj.2,uc009vur.1_5end | |||
|cluster_id=chr1:35497254..35497279,- | |||
|description=CAGE_peak_3_at_ZMYM6_5end | |||
|id=chr1:35497254..35497279,- | |||
|ontology_enrichment_celltype=CL:0000037!4.85e-38!172;CL:0000566!4.85e-38!172;CL:0000988!3.80e-36!182;CL:0002032!9.87e-35!165;CL:0000837!9.87e-35!165;CL:0000738!1.10e-30!140;CL:0002031!3.38e-26!124;CL:0002087!6.72e-24!119;CL:0000763!2.09e-23!112;CL:0000049!2.09e-23!112;CL:0000557!1.23e-15!71;CL:0002057!3.66e-15!42;CL:0000766!5.59e-15!76;CL:0000839!5.80e-15!70;CL:0000860!5.58e-14!45;CL:0002009!1.34e-13!65;CL:0002194!1.40e-12!63;CL:0000576!1.40e-12!63;CL:0000040!1.40e-12!63;CL:0000559!1.40e-12!63;CL:0000134!2.52e-12!358;CL:0000063!2.70e-11!578;CL:0002320!2.88e-11!365;CL:0000542!2.60e-10!53;CL:0000051!2.60e-10!53;CL:0000838!2.83e-10!52;CL:0000219!2.77e-09!390;CL:0000451!1.44e-07!10;CL:0000236!1.85e-07!14;CL:0000945!2.05e-07!24;CL:0000826!2.05e-07!24;CL:0002393!7.41e-07!9;CL:0002397!7.41e-07!9;CL:0000003!8.90e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000576;4.28e-11;48!CL:0000860;1.01e-10;33!CL:0002057;1.01e-10;33!CL:0000451;2.39e-08;10!CL:0000236;3.04e-08;13!CL:0002087;4.05e-08;104!CL:0000766;4.66e-08;69!CL:0000945;5.78e-08;24!CL:0000473;1.80e-07;39!CL:0000234;1.80e-07;39!CL:0000738;1.94e-07;136!CL:0000990;3.28e-07;8!CL:0000763;5.05e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.53e-41,168;CL:0000988,8.05e-41,177;CL:0002032,2.03e-37,161;CL:0000837,2.03e-37,161;CL:0000738,3.89e-34,136;CL:0002031,6.72e-29,120;CL:0000763,4.66e-27,108;CL:0000049,4.66e-27,108;CL:0002087,2.94e-26,115;CL:0000557,2.18e-19,67;CL:0000839,1.44e-18,66;CL:0000766,1.44e-18,72;CL:0000860,5.71e-18,42;CL:0002057,5.71e-18,42;CL:0002009,5.83e-17,61;CL:0002194,1.01e-15,59;CL:0000576,1.01e-15,59;CL:0000040,1.01e-15,59;CL:0000559,1.01e-15,59;CL:0000473,2.24e-15,48;CL:0000234,2.24e-15,48;CL:0000134,1.84e-13,354;CL:0002320,4.70e-12,361;CL:0000219,6.40e-11,386;CL:0000542,1.61e-09,53;CL:0000051,1.61e-09,53;CL:0000838,1.82e-09,52;CL:0000451,1.60e-08,10;CL:0000236,1.88e-08,14;CL:0000945,1.06e-07,24;CL:0000826,1.06e-07,24;CL:0002393,1.06e-07,9;CL:0002397,1.06e-07,9;CL:0000723,1.20e-07,433;CL:0000034,2.24e-07,441;CL:0000990,2.75e-07,8;CL:0000048,4.34e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;2.39e-12;42!CL:0000049;8.72e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.54e-16!102;UBERON:0003061!5.54e-16!102;UBERON:0002193!2.55e-15!112;UBERON:0002371!5.96e-13!80;UBERON:0001474!4.91e-12!86;UBERON:0002384!2.22e-10!375;UBERON:0004765!3.62e-10!101;UBERON:0001434!3.62e-10!101;UBERON:0002405!1.68e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.47e-19,98;UBERON:0003061,3.47e-19,98;UBERON:0002193,2.86e-17,108;UBERON:0002371,4.48e-16,76;UBERON:0002405,4.24e-14,93;UBERON:0001474,1.20e-13,82;UBERON:0004765,6.84e-13,90;UBERON:0002384,9.22e-11,371;UBERON:0001434,4.60e-10,100 | |||
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| ||
|short_description=p3@ZMYM6 | |||
}} | }} |
Latest revision as of 18:18, 17 September 2015
Short description: | p3@ZMYM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZMYM6_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000373333, uc001byf.1, uc001byi.2, uc001byj.2, uc009vur.1_5end |
EntrezGene: | ZMYM6 |
HGNC: | 13050 |
UniProt: | O95789 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.47e-19 | 98 |
blood island | 3.47e-19 | 98 |
hemolymphoid system | 2.86e-17 | 108 |
bone marrow | 4.48e-16 | 76 |
immune system | 4.24e-14 | 93 |
bone element | 1.20e-13 | 82 |
skeletal element | 6.84e-13 | 90 |
connective tissue | 9.22e-11 | 371 |
skeletal system | 4.60e-10 | 100 |