FFCP PHASE1:Hg19::chr13:51484041..51484052,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79621 | |EntrezGene=79621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25671 | |HGNC=25671 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=114bp_to_ENST00000494721_5end | |association_with_transcript=114bp_to_ENST00000494721_5end | ||
|cluster_id=chr13:51484041..51484052,+ | |||
|coexpression_cluster_id=C242 | |coexpression_cluster_id=C242 | ||
|description=CAGE_peak_8_at_RNASEH2B_5end | |description=CAGE_peak_8_at_RNASEH2B_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000037!8.44e-11!172;CL:0000566!8.44e-11!172;CL:0002032!1.06e-09!165;CL:0000837!1.06e-09!165;CL:0000988!1.81e-09!182 | |ontology_enrichment_celltype=CL:0000037!8.44e-11!172;CL:0000566!8.44e-11!172;CL:0002032!1.06e-09!165;CL:0000837!1.06e-09!165;CL:0000988!1.81e-09!182 | ||
|ontology_enrichment_celltype_v019=CL:0000785;1.41e-16;1!CL:0000819;1.41e-16;1!CL:0000236;3.56e-11;13 | |ontology_enrichment_celltype_v019=CL:0000785;1.41e-16;1!CL:0000819;1.41e-16;1!CL:0000236;3.56e-11;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000819,1.41e-16,1;CL:0000236,1.78e-10,14;CL:0000785,5.94e-09,2;CL:0000955,5.94e-09,2;CL:0000818,5.94e-09,2;CL:0000954,5.94e-09,2;CL:0000816,5.94e-09,2;CL:0002032,8.24e-07,161;CL:0000837,8.24e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000954;5.93e-09;2 | |ontology_enrichment_development_v019=CL:0000954;5.93e-09;2 | ||
|ontology_enrichment_disease=DOID:2531!2.35e-22!51;DOID:0060083!2.35e-22!51;DOID:1240!9.28e-17!39;DOID:8692!5.69e-13!31;DOID:0060058!1.24e-08!10;DOID:162!1.51e-07!235;DOID:14566!4.17e-07!239;DOID:0050686!9.33e-07!137 | |ontology_enrichment_disease=DOID:2531!2.35e-22!51;DOID:0060083!2.35e-22!51;DOID:1240!9.28e-17!39;DOID:8692!5.69e-13!31;DOID:0060058!1.24e-08!10;DOID:162!1.51e-07!235;DOID:14566!4.17e-07!239;DOID:0050686!9.33e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:0060073;1.41e-16;1!DOID:8675;1.41e-16;1!DOID:8692;2.27e-12;31!DOID:1240;2.38e-09;39!DOID:2531;4.63e-08;51!DOID:0060083;4.63e-08;51 | |ontology_enrichment_disease_v019=DOID:0060073;1.41e-16;1!DOID:8675;1.41e-16;1!DOID:8692;2.27e-12;31!DOID:1240;2.38e-09;39!DOID:2531;4.63e-08;51!DOID:0060083;4.63e-08;51 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.41e-16,1;DOID:8675,1.41e-16,1;DOID:8692,2.12e-12,31;DOID:2531,1.37e-10,51;DOID:0060083,1.37e-10,51;DOID:1240,7.37e-10,39 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p8@RNASEH2B | |short_description=p8@RNASEH2B | ||
}} | }} |
Latest revision as of 18:13, 17 September 2015
Short description: | p8@RNASEH2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RNASEH2B_5end |
Coexpression cluster: | C242_acute_Chondrocyte_myelodysplastic_granulocyte_biphenotypic_Fibroblast_stomach |
Association with transcript: | 114bp_to_ENST00000494721_5end |
EntrezGene: | RNASEH2B |
HGNC: | 25671 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 1.41e-16 | 1 |
B cell | 1.78e-10 | 14 |
mature B cell | 5.94e-09 | 2 |
pre-B-II cell | 5.94e-09 | 2 |
transitional stage B cell | 5.94e-09 | 2 |
small pre-B-II cell | 5.94e-09 | 2 |
immature B cell | 5.94e-09 | 2 |
hematopoietic oligopotent progenitor cell | 8.24e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.24e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.41e-16 | 1 |
lymphosarcoma | 1.41e-16 | 1 |
myeloid leukemia | 2.12e-12 | 31 |
hematologic cancer | 1.37e-10 | 51 |
immune system cancer | 1.37e-10 | 51 |
leukemia | 7.37e-10 | 39 |