FFCP PHASE1:Hg19::chr7:21468134..21468143,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6671 | |EntrezGene=6671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11209 | |HGNC=11209 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-150bp_to_AB591008,EU446903_5end | |association_with_transcript=-150bp_to_AB591008,EU446903_5end | ||
|cluster_id=chr7:21468134..21468143,+ | |||
|description=CAGE_peak_6_at_SP4_5end | |description=CAGE_peak_6_at_SP4_5end | ||
|id=chr7:21468134..21468143,+ | |id=chr7:21468134..21468143,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.80e-38;7!CL:0000586;1.80e-38;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.18e-38,7;CL:0000586,2.18e-38,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.38e-27;10!UBERON:0005564;2.38e-27;10 | |||
|ontology_enrichment_disease=DOID:162!2.21e-07!235;DOID:14566!6.26e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.01e-13;22!DOID:2994;4.01e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.26e-13,22;DOID:2994,4.26e-13,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.68e-34;8!UBERON:0003135;5.49e-25;11!UBERON:0000991;1.09e-13;21!UBERON:0003101;4.01e-13;22!UBERON:0000079;4.01e-13;22!UBERON:0000922;4.46e-07;49!UBERON:0002323;4.46e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.08e-34,8;UBERON:0003135,6.20e-25,11;UBERON:0000991,1.16e-13,21;UBERON:0009196,1.16e-13,21;UBERON:0009117,1.16e-13,21;UBERON:0005564,1.16e-13,21;UBERON:0004176,4.26e-13,22;UBERON:0003101,4.26e-13,22;UBERON:0000079,4.26e-13,22;UBERON:0002323,7.74e-07,46 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.376627918784408,0,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0.25618263945135,0,0.164437904603676,0.829050053357545,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.472674085820339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.23486899728753,0.323745888736263,0.280901613404497,0,0.491337269247072,0,0,0,0,0,0.336672227908132,0,0,0.438977620880838,0,0,0,0,0,0.211931901159562,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.243947412259191,0,0.348581828608555,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0,0,0,0,0.732555718546747,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0.435050081742686,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0.371606350251437,0,0.569134746787313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0.270455678475983,0,0,0,0,0.606802608747567,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0.689486746482929,0.291604613383254,0.520874984799877,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0,0.189753732724185,0,0.210998064528027,0,0.141353071433941,0.432777279484182,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0.0801588202515337,0,0,0,0.229073192331831,0,0,0,0.235694034616795,0.135904206073614,0.209205692624666,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.169346664131569,0,0,0.482259445395058,0.137539436597234,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.107824811396682,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0.158013611732727,0,1.73858272302579,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0.33883824611688,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0.315543124386369,0,0.436350690340377,0,0.371995018166751,0,0,0.126166424835079,0.437062287854782,0.380095503034311,0.305966489225945,1.3360870263278,1.65410819162721,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0.0717222053926763,0,0.732629417498771,0.320182037633146,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.376627918784408,0,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0.25618263945135,0,0.164437904603676,0.829050053357545,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.472674085820339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.23486899728753,0.323745888736263,0.280901613404497,0,0.491337269247072,0,0,0,0,0,0.336672227908132,0,0,0.438977620880838,0,0,0,0,0,0.211931901159562,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.243947412259191,0,0.348581828608555,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0,0,0,0,0.732555718546747,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0.435050081742686,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0.371606350251437,0,0.569134746787313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0.270455678475983,0,0,0,0,0.606802608747567,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0.689486746482929,0.291604613383254,0.520874984799877,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0,0.189753732724185,0,0.210998064528027,0,0.141353071433941,0.432777279484182,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0.0801588202515337,0,0,0,0.229073192331831,0,0,0,0.235694034616795,0.135904206073614,0.209205692624666,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.169346664131569,0,0,0.482259445395058,0.137539436597234,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.107824811396682,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0.158013611732727,0,1.73858272302579,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0.33883824611688,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0.315543124386369,0,0.436350690340377,0,0.371995018166751,0,0,0.126166424835079,0.437062287854782,0.380095503034311,0.305966489225945,1.3360870263278,1.65410819162721,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0.0717222053926763,0,0.732629417498771,0.320182037633146,0,0,0,0,0,0,0,0 | ||
|short_description=p6@SP4 | |short_description=p6@SP4 | ||
}} | }} |
Latest revision as of 18:13, 17 September 2015
Short description: | p6@SP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SP4_5end |
Coexpression cluster: | NA |
Association with transcript: | -150bp_to_AB591008, EU446903_5end |
EntrezGene: | SP4 |
HGNC: | 11209 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.18e-38 | 7 |
germ cell | 2.18e-38 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 9.08e-34 | 8 |
male reproductive organ | 6.20e-25 | 11 |
gonad | 1.16e-13 | 21 |
indifferent external genitalia | 1.16e-13 | 21 |
indifferent gonad | 1.16e-13 | 21 |
gonad primordium | 1.16e-13 | 21 |
external genitalia | 4.26e-13 | 22 |
male organism | 4.26e-13 | 22 |
male reproductive system | 4.26e-13 | 22 |
body cavity | 7.74e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.26e-13 | 22 |
germ cell cancer | 4.26e-13 | 22 |