FFCP PHASE1:Hg19::chr12:19556947..19556956,+: Difference between revisions
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|id=chr12:19556947..19556956,+
|short_description=p14@AEBP2
|description=CAGE_peak_14_at_AEBP2_5end
|association_with_transcript=-22bp_to_ENST00000538425_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=121536 | |EntrezGene=121536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24051 | |HGNC=24051 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZR7 | |UniProt=F5GZR7 | ||
|association_with_transcript=-22bp_to_ENST00000538425_5end | |||
|cluster_id=chr12:19556947..19556956,+ | |||
|coexpression_cluster_id=C267 | |||
|description=CAGE_peak_14_at_AEBP2_5end | |||
|id=chr12:19556947..19556956,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.64e-56!7;CL:0000586!3.64e-56!7;CL:0002541!6.86e-25!3;CL:0000313!3.25e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0000039;9.68e-64;7!CL:0000586;9.68e-64;7!CL:0002541;1.58e-37;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.14e-63,7;CL:0000586,1.14e-63,7;CL:0002541,2.03e-37,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.53e-14;1!UBERON:0009117;8.12e-12;10!UBERON:0005564;8.12e-12;10 | |||
|ontology_enrichment_disease=DOID:3095!1.24e-28!22;DOID:2994!1.24e-28!22;DOID:1799!7.98e-10!1;DOID:10165!7.98e-10!1;DOID:1798!7.98e-10!1;DOID:2152!3.25e-09!1;DOID:0050687!2.74e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.94e-35;22!DOID:2994;1.94e-35;22!DOID:1799;3.08e-14;1!DOID:10165;3.08e-14;1!DOID:1798;3.08e-14;1!DOID:4468;1.75e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.13e-35,22;DOID:2994,2.13e-35,22;DOID:1799,3.08e-14,1;DOID:10165,3.08e-14,1;DOID:1798,3.08e-14,1;DOID:0050687,3.48e-09,143;DOID:4468,1.64e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.68e-35!8;UBERON:0003135!1.40e-25!11;UBERON:0000476!6.86e-25!3;UBERON:0000920!6.86e-25!3;UBERON:0003124!6.64e-19!7;UBERON:0000991!8.96e-18!21;UBERON:0009196!8.96e-18!21;UBERON:0009117!8.96e-18!21;UBERON:0005564!8.96e-18!21;UBERON:0004176!6.21e-17!22;UBERON:0005631!2.64e-14!14;UBERON:0000158!2.64e-14!14;UBERON:0003101!1.39e-12!22;UBERON:0000079!1.39e-12!22;UBERON:0002323!4.43e-10!46;UBERON:0003133!1.32e-09!48;UBERON:0004458!2.13e-09!49;UBERON:0004911!3.25e-09!1;UBERON:0000478!2.84e-08!24;UBERON:0005156!1.29e-07!59;UBERON:0000990!1.29e-07!59;UBERON:0003886!4.49e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.58e-37;3!UBERON:0000920;1.58e-37;3!UBERON:0000473;1.28e-14;8!UBERON:0005631;9.76e-12;10!UBERON:0000158;9.76e-12;10!UBERON:0003135;8.54e-11;11!UBERON:0000478;1.47e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.03e-37,3;UBERON:0003124,1.30e-28,7;UBERON:0000473,1.34e-14,8;UBERON:0005631,1.74e-14,14;UBERON:0000158,1.74e-14,14;UBERON:0003135,8.83e-11,11;UBERON:0000478,1.50e-08,24 | |||
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|short_description=p14@AEBP2 | |||
}} | }} |
Latest revision as of 18:03, 17 September 2015
Short description: | p14@AEBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_AEBP2_5end |
Coexpression cluster: | C267_pancreatic_placenta_choriocarcinoma_testicular_teratocarcinoma_chorionic_clear |
Association with transcript: | -22bp_to_ENST00000538425_5end |
EntrezGene: | AEBP2 |
HGNC: | 24051 |
UniProt: | F5GZR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.14e-63 | 7 |
germ cell | 1.14e-63 | 7 |
chorionic membrane mesenchymal stem cell | 2.03e-37 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.03e-37 | 3 |
chorion | 1.30e-28 | 7 |
testis | 1.34e-14 | 8 |
extraembryonic membrane | 1.74e-14 | 14 |
membranous layer | 1.74e-14 | 14 |
male reproductive organ | 8.83e-11 | 11 |
extraembryonic structure | 1.50e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.13e-35 | 22 |
germ cell cancer | 2.13e-35 | 22 |
islet cell tumor | 3.08e-14 | 1 |
endocrine pancreas cancer | 3.08e-14 | 1 |
pancreatic endocrine carcinoma | 3.08e-14 | 1 |
cell type cancer | 3.48e-09 | 143 |
clear cell adenocarcinoma | 1.64e-07 | 2 |