FFCP PHASE1:Hg19::chr3:19988566..19988648,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5868 | |EntrezGene=5868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9783 | |HGNC=9783 | ||
|TSSclassifier=strong | |||
|UniProt=P20339,Q6FI44 | |UniProt=P20339,Q6FI44 | ||
|association_with_transcript=0bp_to_ENST00000273047,NM_004162,uc003cbn.2,uc010hey.2,uc011awg.1_5end | |association_with_transcript=0bp_to_ENST00000273047,NM_004162,uc003cbn.2,uc010hey.2,uc011awg.1_5end | ||
|cluster_id=chr3:19988566..19988648,+ | |||
|description=CAGE_peak_1_at_RAB5A_5end | |description=CAGE_peak_1_at_RAB5A_5end | ||
|id=chr3:19988566..19988648,+ | |id=chr3:19988566..19988648,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.15e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-37!115;UBERON:0000073!1.75e-23!94;UBERON:0001016!1.75e-23!94;UBERON:0001049!7.42e-22!57;UBERON:0005068!7.42e-22!57;UBERON:0006241!7.42e-22!57;UBERON:0007135!7.42e-22!57;UBERON:0001017!1.83e-21!82;UBERON:0005743!2.81e-21!86;UBERON:0002780!1.09e-18!41;UBERON:0001890!1.09e-18!41;UBERON:0006240!1.09e-18!41;UBERON:0002616!1.85e-18!59;UBERON:0003080!2.63e-18!42;UBERON:0000955!1.24e-17!69;UBERON:0006238!1.24e-17!69;UBERON:0002346!6.75e-17!90;UBERON:0003075!1.19e-16!86;UBERON:0007284!1.19e-16!86;UBERON:0002020!6.06e-15!34;UBERON:0003528!6.06e-15!34;UBERON:0001893!9.03e-15!34;UBERON:0002791!3.01e-14!33;UBERON:0001869!9.92e-14!32;UBERON:0000924!2.84e-12!173;UBERON:0006601!2.84e-12!173;UBERON:0003056!3.82e-12!61;UBERON:0004121!6.38e-12!169;UBERON:0002619!7.86e-11!22;UBERON:0000956!3.53e-10!25;UBERON:0000203!3.53e-10!25;UBERON:0000153!4.72e-10!129;UBERON:0007811!4.72e-10!129;UBERON:0000033!8.11e-10!123;UBERON:0001950!8.96e-10!20;UBERON:0000468!6.68e-08!659;UBERON:0000922!6.75e-08!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.19e-13;41!UBERON:0001890;1.19e-13;41!UBERON:0003528;8.82e-13;34!UBERON:0002020;8.82e-13;34!UBERON:0001893;9.80e-13;34!UBERON:0002791;2.31e-12;32!UBERON:0001869;2.40e-12;32!UBERON:0000073;2.68e-12;53!UBERON:0002616;2.68e-12;53!UBERON:0002619;8.15e-11;22!UBERON:0007023;1.60e-10;114!UBERON:0000956;3.69e-10;25!UBERON:0000203;3.69e-10;25!UBERON:0001950;9.30e-10;20!UBERON:0001016;9.57e-09;83!UBERON:0001017;1.55e-08;75!UBERON:0000955;2.09e-08;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.37e-37,114;UBERON:0001016,7.12e-24,89;UBERON:0001049,3.44e-22,56;UBERON:0005068,3.44e-22,56;UBERON:0006241,3.44e-22,56;UBERON:0007135,3.44e-22,56;UBERON:0001017,1.11e-21,81;UBERON:0000073,1.73e-20,53;UBERON:0002616,1.73e-20,53;UBERON:0002780,1.09e-18,41;UBERON:0001890,1.09e-18,41;UBERON:0003080,1.09e-18,41;UBERON:0006240,1.09e-18,41;UBERON:0000955,7.62e-18,68;UBERON:0006238,7.62e-18,68;UBERON:0002346,1.88e-16,86;UBERON:0003075,3.26e-16,82;UBERON:0007284,3.26e-16,82;UBERON:0003528,6.06e-15,34;UBERON:0002020,6.06e-15,34;UBERON:0001893,9.03e-15,34;UBERON:0011216,5.50e-14,223;UBERON:0002791,9.76e-14,32;UBERON:0001869,9.92e-14,32;UBERON:0003056,7.57e-13,61;UBERON:0004121,9.13e-12,171;UBERON:0000924,9.13e-12,171;UBERON:0006601,9.13e-12,171;UBERON:0002619,7.86e-11,22;UBERON:0000956,3.53e-10,25;UBERON:0000203,3.53e-10,25;UBERON:0010314,5.80e-10,132;UBERON:0001950,8.96e-10,20;UBERON:0010371,2.18e-09,104;UBERON:0000922,3.23e-07,592 | |||
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| ||
|short_description=p1@RAB5A | |short_description=p1@RAB5A | ||
}} | }} |
Latest revision as of 18:01, 17 September 2015
Short description: | p1@RAB5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAB5A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000273047, NM_004162, uc003cbn.2, uc010hey.2, uc011awg.1_5end |
EntrezGene: | RAB5A |
HGNC: | 9783 |
UniProt: | P20339Q6FI44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data