FFCP PHASE1:Hg19::chr2:159313452..159313498,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8502 | |EntrezGene=8502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9026 | |HGNC=9026 | ||
|TSSclassifier=strong | |||
|UniProt=E7EST6,F8W7E2,Q99569 | |UniProt=E7EST6,F8W7E2,Q99569 | ||
|association_with_transcript=0bp_to_ENST00000426248,ENST00000428353,NM_001005476,NM_003628,uc002tzt.1,uc002tzu.2,uc002tzv.2,uc002tzw.2,uc002tzx.2_5end | |association_with_transcript=0bp_to_ENST00000426248,ENST00000428353,NM_001005476,NM_003628,uc002tzt.1,uc002tzu.2,uc002tzv.2,uc002tzw.2,uc002tzx.2_5end | ||
|cluster_id=chr2:159313452..159313498,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_PKP4_5end | |description=CAGE_peak_1_at_PKP4_5end | ||
|id=chr2:159313452..159313498,+ | |id=chr2:159313452..159313498,+ | ||
|ontology_enrichment_celltype=CL:0000066!9.36e-09!254 | |ontology_enrichment_celltype=CL:0000066!9.36e-09!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.26e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.52e-09;82 | |||
|ontology_enrichment_disease=DOID:305!1.32e-09!106;DOID:0050687!1.50e-09!143;DOID:7!2.80e-07!39;DOID:162!9.72e-07!235 | |ontology_enrichment_disease=DOID:305!1.32e-09!106;DOID:0050687!1.50e-09!143;DOID:7!2.80e-07!39;DOID:162!9.72e-07!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.44e-09,106;DOID:0050687,1.67e-09,143;DOID:7,4.26e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.49e-26!57;UBERON:0005068!2.49e-26!57;UBERON:0006241!2.49e-26!57;UBERON:0007135!2.49e-26!57;UBERON:0003075!9.63e-26!86;UBERON:0007284!9.63e-26!86;UBERON:0007023!1.46e-25!115;UBERON:0002346!3.41e-25!90;UBERON:0002616!6.10e-25!59;UBERON:0000955!5.03e-24!69;UBERON:0006238!5.03e-24!69;UBERON:0000033!1.40e-23!123;UBERON:0005743!1.90e-23!86;UBERON:0001017!2.57e-23!82;UBERON:0000153!1.18e-22!129;UBERON:0007811!1.18e-22!129;UBERON:0000073!1.56e-22!94;UBERON:0001016!1.56e-22!94;UBERON:0003080!8.94e-21!42;UBERON:0004121!9.13e-21!169;UBERON:0000924!1.05e-20!173;UBERON:0006601!1.05e-20!173;UBERON:0002780!1.53e-20!41;UBERON:0001890!1.53e-20!41;UBERON:0006240!1.53e-20!41;UBERON:0000477!1.15e-19!286;UBERON:0000475!1.29e-19!365;UBERON:0004111!4.11e-19!241;UBERON:0003056!9.23e-19!61;UBERON:0002020!1.30e-17!34;UBERON:0003528!1.30e-17!34;UBERON:0001893!1.31e-17!34;UBERON:0000119!4.94e-17!312;UBERON:0002791!5.61e-17!33;UBERON:0000483!8.96e-17!309;UBERON:0001869!2.86e-16!32;UBERON:0000025!5.70e-16!194;UBERON:0000481!8.61e-15!347;UBERON:0002619!7.53e-13!22;UBERON:0000064!3.84e-12!219;UBERON:0000956!4.32e-12!25;UBERON:0000203!4.32e-12!25;UBERON:0001950!1.18e-11!20;UBERON:0000062!1.38e-11!511;UBERON:0000468!1.53e-07!659;UBERON:0002308!3.75e-07!9;UBERON:0000125!3.75e-07!9;UBERON:0002420!6.47e-07!9;UBERON:0007245!6.47e-07!9;UBERON:0010009!6.47e-07!9;UBERON:0010011!6.47e-07!9;UBERON:0000454!6.47e-07!9;UBERON:0003076!8.64e-07!15;UBERON:0003057!8.64e-07!15 | |ontology_enrichment_uberon=UBERON:0001049!2.49e-26!57;UBERON:0005068!2.49e-26!57;UBERON:0006241!2.49e-26!57;UBERON:0007135!2.49e-26!57;UBERON:0003075!9.63e-26!86;UBERON:0007284!9.63e-26!86;UBERON:0007023!1.46e-25!115;UBERON:0002346!3.41e-25!90;UBERON:0002616!6.10e-25!59;UBERON:0000955!5.03e-24!69;UBERON:0006238!5.03e-24!69;UBERON:0000033!1.40e-23!123;UBERON:0005743!1.90e-23!86;UBERON:0001017!2.57e-23!82;UBERON:0000153!1.18e-22!129;UBERON:0007811!1.18e-22!129;UBERON:0000073!1.56e-22!94;UBERON:0001016!1.56e-22!94;UBERON:0003080!8.94e-21!42;UBERON:0004121!9.13e-21!169;UBERON:0000924!1.05e-20!173;UBERON:0006601!1.05e-20!173;UBERON:0002780!1.53e-20!41;UBERON:0001890!1.53e-20!41;UBERON:0006240!1.53e-20!41;UBERON:0000477!1.15e-19!286;UBERON:0000475!1.29e-19!365;UBERON:0004111!4.11e-19!241;UBERON:0003056!9.23e-19!61;UBERON:0002020!1.30e-17!34;UBERON:0003528!1.30e-17!34;UBERON:0001893!1.31e-17!34;UBERON:0000119!4.94e-17!312;UBERON:0002791!5.61e-17!33;UBERON:0000483!8.96e-17!309;UBERON:0001869!2.86e-16!32;UBERON:0000025!5.70e-16!194;UBERON:0000481!8.61e-15!347;UBERON:0002619!7.53e-13!22;UBERON:0000064!3.84e-12!219;UBERON:0000956!4.32e-12!25;UBERON:0000203!4.32e-12!25;UBERON:0001950!1.18e-11!20;UBERON:0000062!1.38e-11!511;UBERON:0000468!1.53e-07!659;UBERON:0002308!3.75e-07!9;UBERON:0000125!3.75e-07!9;UBERON:0002420!6.47e-07!9;UBERON:0007245!6.47e-07!9;UBERON:0010009!6.47e-07!9;UBERON:0010011!6.47e-07!9;UBERON:0000454!6.47e-07!9;UBERON:0003076!8.64e-07!15;UBERON:0003057!8.64e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.96e-15;34!UBERON:0003528;2.16e-15;34!UBERON:0002020;2.16e-15;34!UBERON:0002780;2.47e-15;41!UBERON:0001890;2.47e-15;41!UBERON:0002791;4.71e-15;32!UBERON:0001869;5.03e-15;32!UBERON:0000073;3.10e-14;53!UBERON:0002616;3.10e-14;53!UBERON:0002619;5.69e-13;22!UBERON:0000956;2.13e-12;25!UBERON:0000203;2.13e-12;25!UBERON:0001950;9.26e-12;20!UBERON:0000955;4.25e-11;68!UBERON:0001017;2.51e-10;75!UBERON:0001016;3.24e-09;83!UBERON:0007023;6.05e-08;114!UBERON:0000125;3.17e-07;9!UBERON:0002308;3.17e-07;9!UBERON:0002420;5.62e-07;9!UBERON:0007245;5.62e-07;9!UBERON:0010009;5.62e-07;9!UBERON:0010011;5.62e-07;9!UBERON:0000454;5.62e-07;9 | |||
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| ||
|short_description=p1@PKP4 | |short_description=p1@PKP4 | ||
}} | }} |
Latest revision as of 18:00, 17 September 2015
Short description: | p1@PKP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PKP4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000426248, ENST00000428353, NM_001005476, NM_003628, uc002tzt.1, uc002tzu.2, uc002tzv.2, uc002tzw.2, uc002tzx.2_5end |
EntrezGene: | PKP4 |
HGNC: | 9026 |
UniProt: | E7EST6F8W7E2Q99569 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.26e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.44e-09 | 106 |
cell type cancer | 1.67e-09 | 143 |
disease of anatomical entity | 4.26e-07 | 39 |