FFCP PHASE1:Hg19::chr2:159313379..159313428,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:159313379..159313428,+
|short_description=p2@PKP4
|description=CAGE_peak_2_at_PKP4_5end
|association_with_transcript=-47bp_to_ENST00000426248,ENST000004283...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8502 | |EntrezGene=8502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9026 | |HGNC=9026 | ||
|TSSclassifier=strong | |||
|UniProt=E7EST6,F8W7E2,Q99569 | |UniProt=E7EST6,F8W7E2,Q99569 | ||
|association_with_transcript=-47bp_to_ENST00000426248,ENST00000428353,NM_001005476,NM_003628,uc002tzt.1,uc002tzu.2,uc002tzv.2,uc002tzw.2,uc002tzx.2_5end | |||
|cluster_id=chr2:159313379..159313428,+ | |||
|description=CAGE_peak_2_at_PKP4_5end | |||
|id=chr2:159313379..159313428,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.04e-09;82 | |||
|ontology_enrichment_disease=DOID:0050687!6.80e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.27e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.98e-30!115;UBERON:0001049!7.60e-27!57;UBERON:0005068!7.60e-27!57;UBERON:0006241!7.60e-27!57;UBERON:0007135!7.60e-27!57;UBERON:0002346!9.24e-25!90;UBERON:0003075!4.49e-24!86;UBERON:0007284!4.49e-24!86;UBERON:0003080!1.56e-22!42;UBERON:0002616!2.75e-22!59;UBERON:0002780!3.00e-22!41;UBERON:0001890!3.00e-22!41;UBERON:0006240!3.00e-22!41;UBERON:0000033!7.44e-22!123;UBERON:0000153!2.50e-21!129;UBERON:0007811!2.50e-21!129;UBERON:0000955!5.62e-21!69;UBERON:0006238!5.62e-21!69;UBERON:0000924!8.44e-21!173;UBERON:0006601!8.44e-21!173;UBERON:0005743!2.31e-20!86;UBERON:0001017!3.00e-20!82;UBERON:0004121!4.94e-20!169;UBERON:0000073!5.08e-20!94;UBERON:0001016!5.08e-20!94;UBERON:0003056!2.87e-19!61;UBERON:0001893!2.10e-18!34;UBERON:0002020!2.70e-18!34;UBERON:0003528!2.70e-18!34;UBERON:0002791!9.61e-18!33;UBERON:0001869!3.78e-17!32;UBERON:0000477!2.78e-13!286;UBERON:0000481!2.84e-13!347;UBERON:0000064!4.34e-13!219;UBERON:0004111!6.95e-13!241;UBERON:0002619!1.07e-12!22;UBERON:0000956!1.21e-12!25;UBERON:0000203!1.21e-12!25;UBERON:0000475!7.63e-12!365;UBERON:0001950!1.94e-11!20;UBERON:0000025!4.79e-11!194;UBERON:0000119!4.93e-11!312;UBERON:0000483!4.96e-11!309;UBERON:0000062!5.04e-08!511;UBERON:0002420!1.94e-07!9;UBERON:0007245!1.94e-07!9;UBERON:0010009!1.94e-07!9;UBERON:0010011!1.94e-07!9;UBERON:0000454!1.94e-07!9;UBERON:0004119!2.77e-07!169;UBERON:0000925!2.77e-07!169;UBERON:0006595!2.77e-07!169;UBERON:0002308!2.90e-07!9;UBERON:0000125!2.90e-07!9;UBERON:0001007!6.50e-07!155;UBERON:0001555!6.50e-07!155;UBERON:0007026!6.50e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.40e-16;41!UBERON:0001890;1.40e-16;41!UBERON:0003528;1.59e-16;34!UBERON:0002020;1.59e-16;34!UBERON:0001893;2.70e-16;34!UBERON:0001869;4.54e-16;32!UBERON:0002791;4.63e-16;32!UBERON:0000073;5.00e-15;53!UBERON:0002616;5.00e-15;53!UBERON:0000956;3.58e-13;25!UBERON:0000203;3.58e-13;25!UBERON:0002619;4.70e-13;22!UBERON:0001950;9.67e-12;20!UBERON:0000955;1.29e-10;68!UBERON:0007023;5.06e-10;114!UBERON:0001017;2.65e-09;75!UBERON:0001016;1.61e-08;83!UBERON:0002420;1.19e-07;9!UBERON:0007245;1.19e-07;9!UBERON:0010009;1.19e-07;9!UBERON:0010011;1.19e-07;9!UBERON:0000454;1.19e-07;9!UBERON:0000125;1.88e-07;9!UBERON:0002308;1.88e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.66e-30,114;UBERON:0001049,1.02e-26,56;UBERON:0005068,1.02e-26,56;UBERON:0006241,1.02e-26,56;UBERON:0007135,1.02e-26,56;UBERON:0000073,4.39e-25,53;UBERON:0002616,4.39e-25,53;UBERON:0002346,2.30e-23,86;UBERON:0003075,1.12e-22,82;UBERON:0007284,1.12e-22,82;UBERON:0002780,2.23e-22,41;UBERON:0001890,2.23e-22,41;UBERON:0003080,2.23e-22,41;UBERON:0006240,2.23e-22,41;UBERON:0011216,2.40e-21,223;UBERON:0000955,2.28e-20,68;UBERON:0006238,2.28e-20,68;UBERON:0001017,6.01e-20,81;UBERON:0010314,6.47e-20,132;UBERON:0003056,7.23e-20,61;UBERON:0004121,1.04e-19,171;UBERON:0000924,1.04e-19,171;UBERON:0006601,1.04e-19,171;UBERON:0001016,1.45e-19,89;UBERON:0010371,5.64e-19,104;UBERON:0001893,1.70e-18,34;UBERON:0003528,2.20e-18,34;UBERON:0002020,2.20e-18,34;UBERON:0001869,3.15e-17,32;UBERON:0002791,3.53e-17,32;UBERON:0002619,9.98e-13,22;UBERON:0000956,1.12e-12,25;UBERON:0000203,1.12e-12,25;UBERON:0004111,2.10e-12,240;UBERON:0001950,1.86e-11,20;UBERON:0000025,6.19e-11,192;UBERON:0000119,3.01e-10,309;UBERON:0000483,3.04e-10,306;UBERON:0002420,1.69e-07,9;UBERON:0007245,1.69e-07,9;UBERON:0010009,1.69e-07,9;UBERON:0010011,1.69e-07,9;UBERON:0000454,1.69e-07,9;UBERON:0000125,2.53e-07,9;UBERON:0002308,2.53e-07,9;UBERON:0004119,5.27e-07,160;UBERON:0000925,5.27e-07,160;UBERON:0006595,5.27e-07,160 | |||
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| ||
|short_description=p2@PKP4 | |||
}} | }} |
Latest revision as of 17:58, 17 September 2015
Short description: | p2@PKP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PKP4_5end |
Coexpression cluster: | NA |
Association with transcript: | -47bp_to_ENST00000426248, ENST00000428353, NM_001005476, NM_003628, uc002tzt.1, uc002tzu.2, uc002tzv.2, uc002tzw.2, uc002tzx.2_5end |
EntrezGene: | PKP4 |
HGNC: | 9026 |
UniProt: | E7EST6F8W7E2Q99569 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.27e-07 | 143 |