FFCP PHASE1:Hg19::chr19:3785229..3785244,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4145 | |EntrezGene=4145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6906 | |HGNC=6906 | ||
|TSSclassifier=strong | |||
|UniProt=Q16176 | |UniProt=Q16176 | ||
|association_with_transcript=-98bp_to_S71669_5end | |association_with_transcript=-98bp_to_S71669_5end | ||
|cluster_id=chr19:3785229..3785244,- | |||
|coexpression_cluster_id=C166 | |coexpression_cluster_id=C166 | ||
|description=CAGE_peak_5_at_MATK_5end | |description=CAGE_peak_5_at_MATK_5end | ||
|id=chr19:3785229..3785244,- | |id=chr19:3785229..3785244,- | ||
|ontology_enrichment_celltype=CL:0002009!1.38e-27!65;CL:0000557!1.20e-26!71;CL:0002194!2.33e-26!63;CL:0000576!2.33e-26!63;CL:0000040!2.33e-26!63;CL:0000559!2.33e-26!63;CL:0000839!5.64e-25!70;CL:0000766!2.14e-24!76;CL:0000763!3.71e-18!112;CL:0000049!3.71e-18!112;CL:0000860!1.25e-17!45;CL:0002057!4.87e-15!42;CL:0000235!9.88e-15!10;CL:0002031!2.41e-14!124;CL:0000738!6.72e-13!140;CL:0002087!6.78e-13!119;CL:0002032!1.50e-11!165;CL:0000837!1.50e-11!165;CL:0000037!9.52e-11!172;CL:0000566!9.52e-11!172;CL:0000988!1.02e-09!182;CL:0000840!6.78e-09!5;CL:0001029!6.78e-09!5 | |ontology_enrichment_celltype=CL:0002009!1.38e-27!65;CL:0000557!1.20e-26!71;CL:0002194!2.33e-26!63;CL:0000576!2.33e-26!63;CL:0000040!2.33e-26!63;CL:0000559!2.33e-26!63;CL:0000839!5.64e-25!70;CL:0000766!2.14e-24!76;CL:0000763!3.71e-18!112;CL:0000049!3.71e-18!112;CL:0000860!1.25e-17!45;CL:0002057!4.87e-15!42;CL:0000235!9.88e-15!10;CL:0002031!2.41e-14!124;CL:0000738!6.72e-13!140;CL:0002087!6.78e-13!119;CL:0002032!1.50e-11!165;CL:0000837!1.50e-11!165;CL:0000037!9.52e-11!172;CL:0000566!9.52e-11!172;CL:0000988!1.02e-09!182;CL:0000840!6.78e-09!5;CL:0001029!6.78e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000235;2.96e-32;6!CL:0000473;3.91e-26;39!CL:0000234;3.91e-26;39!CL:0000840;2.62e-18;5!CL:0000860;1.20e-14;33!CL:0002057;1.20e-14;33!CL:0000990;2.06e-12;8!CL:0000766;4.95e-11;69!CL:0000451;2.94e-10;10!CL:0000576;2.87e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.82e-36,59;CL:0000576,1.82e-36,59;CL:0000040,1.82e-36,59;CL:0000559,1.82e-36,59;CL:0002009,3.09e-35,61;CL:0000839,1.75e-32,66;CL:0000235,2.96e-32,6;CL:0000557,5.55e-32,67;CL:0000766,1.12e-29,72;CL:0000473,4.32e-28,48;CL:0000234,4.32e-28,48;CL:0000763,2.66e-19,108;CL:0000049,2.66e-19,108;CL:0000840,2.47e-18,5;CL:0001029,2.47e-18,5;CL:0002087,4.99e-18,115;CL:0002031,3.29e-17,120;CL:0000738,5.51e-15,136;CL:0000860,6.34e-13,42;CL:0002057,6.34e-13,42;CL:0000990,1.98e-12,8;CL:0002032,2.20e-12,161;CL:0000837,2.20e-12,161;CL:0000037,8.58e-12,168;CL:0000988,4.23e-11,177;CL:0000451,2.85e-10,10 | |||
|ontology_enrichment_development_v019=CL:0002057;6.06e-10;42!CL:0000049;5.31e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.19e-23!80;UBERON:0001474!1.05e-20!86;UBERON:0004765!6.09e-18!101;UBERON:0001434!6.09e-18!101;UBERON:0002390!2.65e-16!102;UBERON:0003061!2.65e-16!102;UBERON:0002193!3.36e-14!112;UBERON:0002405!1.21e-13!115;UBERON:0002204!9.10e-09!167 | |ontology_enrichment_uberon=UBERON:0002371!8.19e-23!80;UBERON:0001474!1.05e-20!86;UBERON:0004765!6.09e-18!101;UBERON:0001434!6.09e-18!101;UBERON:0002390!2.65e-16!102;UBERON:0003061!2.65e-16!102;UBERON:0002193!3.36e-14!112;UBERON:0002405!1.21e-13!115;UBERON:0002204!9.10e-09!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.78e-28,76;UBERON:0001474,6.76e-26,82;UBERON:0004765,1.81e-23,90;UBERON:0002405,1.16e-22,93;UBERON:0002390,1.98e-21,98;UBERON:0003061,1.98e-21,98;UBERON:0001434,5.70e-21,100;UBERON:0002193,2.66e-19,108;UBERON:0002204,7.11e-12,167;UBERON:0003081,1.94e-09,203 | |||
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| ||
|short_description=p5@MATK | |short_description=p5@MATK | ||
}} | }} |
Latest revision as of 17:57, 17 September 2015
Short description: | p5@MATK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MATK_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | -98bp_to_S71669_5end |
EntrezGene: | MATK |
HGNC: | 6906 |
UniProt: | Q16176 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.82e-36 | 59 |
monocyte | 1.82e-36 | 59 |
monoblast | 1.82e-36 | 59 |
promonocyte | 1.82e-36 | 59 |
macrophage dendritic cell progenitor | 3.09e-35 | 61 |
myeloid lineage restricted progenitor cell | 1.75e-32 | 66 |
macrophage | 2.96e-32 | 6 |
granulocyte monocyte progenitor cell | 5.55e-32 | 67 |
myeloid leukocyte | 1.12e-29 | 72 |
defensive cell | 4.32e-28 | 48 |
phagocyte | 4.32e-28 | 48 |
myeloid cell | 2.66e-19 | 108 |
common myeloid progenitor | 2.66e-19 | 108 |
immature conventional dendritic cell | 2.47e-18 | 5 |
common dendritic progenitor | 2.47e-18 | 5 |
nongranular leukocyte | 4.99e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 3.29e-17 | 120 |
leukocyte | 5.51e-15 | 136 |
classical monocyte | 6.34e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.34e-13 | 42 |
conventional dendritic cell | 1.98e-12 | 8 |
hematopoietic oligopotent progenitor cell | 2.20e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.20e-12 | 161 |
hematopoietic stem cell | 8.58e-12 | 168 |
hematopoietic cell | 4.23e-11 | 177 |
dendritic cell | 2.85e-10 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.78e-28 | 76 |
bone element | 6.76e-26 | 82 |
skeletal element | 1.81e-23 | 90 |
immune system | 1.16e-22 | 93 |
hematopoietic system | 1.98e-21 | 98 |
blood island | 1.98e-21 | 98 |
skeletal system | 5.70e-21 | 100 |
hemolymphoid system | 2.66e-19 | 108 |
musculoskeletal system | 7.11e-12 | 167 |
lateral plate mesoderm | 1.94e-09 | 203 |