FFCP PHASE1:Hg19::chr12:1929857..1929866,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=654429 | |EntrezGene=654429 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32443 | |HGNC=32443 | ||
|TSSclassifier=strong | |||
|UniProt=A7E2U6 | |UniProt=A7E2U6 | ||
|association_with_transcript=60bp_to_ENST00000535041_5end | |association_with_transcript=60bp_to_ENST00000535041_5end | ||
|cluster_id=chr12:1929857..1929866,+ | |||
|description=CAGE_peak_8_at_LRTM2_5end | |description=CAGE_peak_8_at_LRTM2_5end | ||
|id=chr12:1929857..1929866,+ | |id=chr12:1929857..1929866,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;6.30e-26;2 | |ontology_enrichment_celltype_v019=CL:0000047;6.30e-26;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.59e-07,8 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p8@LRTM2 | |short_description=p8@LRTM2 | ||
}} | }} |
Latest revision as of 17:52, 17 September 2015
Short description: | p8@LRTM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LRTM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 60bp_to_ENST00000535041_5end |
EntrezGene: | LRTM2 |
HGNC: | 32443 |
UniProt: | A7E2U6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.59e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
paracentral gyrus | 3.99e-50 | 1 |
occipital pole | 6.58e-50 | 1 |
pole of cerebral hemisphere | 6.58e-50 | 1 |
occipital lobe | 3.60e-11 | 5 |
central nervous system | 2.17e-10 | 81 |
gyrus | 1.44e-09 | 6 |
nervous system | 1.88e-09 | 89 |
brain | 3.04e-07 | 68 |
future brain | 3.04e-07 | 68 |
cerebral hemisphere | 5.04e-07 | 32 |