FFCP PHASE1:Hg19::chr1:156721306..156721317,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:156721306..156721317,- to FFCP PHASE1:Hg19::chr1:156721306..156721317,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3068 | |EntrezGene=3068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4856 | |HGNC=4856 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z525 | |UniProt=B7Z525 | ||
|association_with_transcript=-13bp_to_ENST00000406805_5end | |||
|cluster_id=chr1:156721306..156721317,- | |||
|description=CAGE_peak_5_at_HDGF_5end | |||
|id=chr1:156721306..156721317,- | |||
|ontology_enrichment_celltype=CL:0000066!4.51e-08!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.88e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.32e-08!143;DOID:305!7.52e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.47e-08,143;DOID:305,7.27e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000481!1.39e-21!347;UBERON:0000064!5.34e-20!219;UBERON:0000475!1.08e-17!365;UBERON:0000483!1.79e-16!309;UBERON:0000119!4.91e-16!312;UBERON:0003075!5.58e-15!86;UBERON:0007284!5.58e-15!86;UBERON:0002346!2.66e-14!90;UBERON:0004121!4.57e-12!169;UBERON:0000025!7.40e-12!194;UBERON:0000924!8.89e-12!173;UBERON:0006601!8.89e-12!173;UBERON:0001049!1.58e-11!57;UBERON:0005068!1.58e-11!57;UBERON:0006241!1.58e-11!57;UBERON:0007135!1.58e-11!57;UBERON:0000477!1.78e-11!286;UBERON:0000468!3.29e-11!659;UBERON:0000073!3.44e-11!94;UBERON:0001016!3.44e-11!94;UBERON:0005743!3.88e-11!86;UBERON:0004111!1.04e-10!241;UBERON:0000480!1.61e-10!626;UBERON:0002050!1.71e-10!605;UBERON:0005423!1.71e-10!605;UBERON:0003056!1.71e-10!61;UBERON:0007023!1.71e-10!115;UBERON:0000922!1.76e-10!612;UBERON:0000923!2.53e-10!604;UBERON:0005291!2.53e-10!604;UBERON:0006598!2.53e-10!604;UBERON:0002532!2.53e-10!604;UBERON:0000955!2.75e-10!69;UBERON:0006238!2.75e-10!69;UBERON:0001017!2.98e-10!82;UBERON:0000467!3.59e-10!625;UBERON:0000033!6.48e-10!123;UBERON:0000062!8.75e-10!511;UBERON:0003104!2.42e-09!238;UBERON:0009142!2.42e-09!238;UBERON:0000063!3.03e-09!97;UBERON:0002616!4.61e-09!59;UBERON:0002100!7.99e-09!216;UBERON:0000153!9.77e-09!129;UBERON:0007811!9.77e-09!129;UBERON:0003103!1.19e-08!69;UBERON:0005177!1.58e-08!107;UBERON:0003080!2.70e-08!42;UBERON:0002780!4.14e-08!41;UBERON:0001890!4.14e-08!41;UBERON:0006240!4.14e-08!41;UBERON:0009569!1.60e-07!113;UBERON:0002020!2.72e-07!34;UBERON:0003528!2.72e-07!34;UBERON:0001893!3.08e-07!34;UBERON:0001048!3.34e-07!168;UBERON:0002791!6.17e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,1.79e-15,306;UBERON:0000119,4.75e-15,309;UBERON:0003075,3.85e-14,82;UBERON:0007284,3.85e-14,82;UBERON:0002346,1.80e-13,86;UBERON:0010314,1.96e-12,132;UBERON:0011216,2.53e-12,223;UBERON:0000025,5.97e-12,192;UBERON:0004121,1.56e-11,171;UBERON:0000924,1.56e-11,171;UBERON:0006601,1.56e-11,171;UBERON:0010371,1.63e-11,104;UBERON:0001049,2.25e-11,56;UBERON:0005068,2.25e-11,56;UBERON:0006241,2.25e-11,56;UBERON:0007135,2.25e-11,56;UBERON:0004111,5.39e-11,240;UBERON:0000073,3.20e-10,53;UBERON:0002616,3.20e-10,53;UBERON:0000955,3.92e-10,68;UBERON:0006238,3.92e-10,68;UBERON:0001016,4.13e-10,89;UBERON:0001017,4.85e-10,81;UBERON:0007023,5.13e-10,114;UBERON:0003056,6.75e-10,61;UBERON:0003103,3.89e-09,68;UBERON:0002100,8.24e-09,199;UBERON:0005423,2.64e-08,581;UBERON:0000922,3.81e-08,592;UBERON:0002780,3.93e-08,41;UBERON:0001890,3.93e-08,41;UBERON:0003080,3.93e-08,41;UBERON:0006240,3.93e-08,41;UBERON:0009569,1.12e-07,112;UBERON:0005177,2.30e-07,101;UBERON:0003104,2.52e-07,160;UBERON:0009142,2.52e-07,160;UBERON:0003528,2.61e-07,34;UBERON:0002020,2.61e-07,34;UBERON:0001893,2.95e-07,34;UBERON:0001048,7.64e-07,160 | |||
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| ||
|short_description=p5@HDGF | |||
}} | }} |
Latest revision as of 17:51, 17 September 2015
Short description: | p5@HDGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HDGF_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000406805_5end |
EntrezGene: | HDGF |
HGNC: | 4856 |
UniProt: | B7Z525 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.88e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.47e-08 | 143 |
carcinoma | 7.27e-08 | 106 |