FFCP PHASE1:Hg19::chr2:55844886..55844897,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57223 | |EntrezGene=57223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29267 | |HGNC=29267 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_uc002rze.2_5end | |association_with_transcript=13bp_to_uc002rze.2_5end | ||
|cluster_id=chr2:55844886..55844897,- | |||
|description=CAGE_peak_7_at_SMEK2_5end | |description=CAGE_peak_7_at_SMEK2_5end | ||
|id=chr2:55844886..55844897,- | |id=chr2:55844886..55844897,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.02e-11!235;DOID:14566!6.88e-11!239;DOID:305!1.06e-09!106;DOID:0050687!1.87e-08!143 | |ontology_enrichment_disease=DOID:162!3.02e-11!235;DOID:14566!6.88e-11!239;DOID:305!1.06e-09!106;DOID:0050687!1.87e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.02e-09!57;UBERON:0005068!4.02e-09!57;UBERON:0006241!4.02e-09!57;UBERON:0007135!4.02e-09!57;UBERON:0001017!2.38e-08!82;UBERON:0002780!1.41e-07!41;UBERON:0001890!1.41e-07!41;UBERON:0006240!1.41e-07!41;UBERON:0000073!2.23e-07!94;UBERON:0001016!2.23e-07!94;UBERON:0005743!2.35e-07!86;UBERON:0000955!2.46e-07!69;UBERON:0006238!2.46e-07!69;UBERON:0002616!3.41e-07!59;UBERON:0003080!5.28e-07!42 | |ontology_enrichment_uberon=UBERON:0001049!4.02e-09!57;UBERON:0005068!4.02e-09!57;UBERON:0006241!4.02e-09!57;UBERON:0007135!4.02e-09!57;UBERON:0001017!2.38e-08!82;UBERON:0002780!1.41e-07!41;UBERON:0001890!1.41e-07!41;UBERON:0006240!1.41e-07!41;UBERON:0000073!2.23e-07!94;UBERON:0001016!2.23e-07!94;UBERON:0005743!2.35e-07!86;UBERON:0000955!2.46e-07!69;UBERON:0006238!2.46e-07!69;UBERON:0002616!3.41e-07!59;UBERON:0003080!5.28e-07!42 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.94e-08,56;UBERON:0005068,5.94e-08,56;UBERON:0006241,5.94e-08,56;UBERON:0007135,5.94e-08,56;UBERON:0001017,1.13e-07,81;UBERON:0001016,2.03e-07,89;UBERON:0000073,7.65e-07,53;UBERON:0002616,7.65e-07,53 | |||
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| ||
|short_description=p7@SMEK2 | |short_description=p7@SMEK2 | ||
}} | }} |
Latest revision as of 17:44, 17 September 2015
Short description: | p7@SMEK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SMEK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_uc002rze.2_5end |
EntrezGene: | SMEK2 |
HGNC: | 29267 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 5.94e-08 | 56 |
neural rod | 5.94e-08 | 56 |
future spinal cord | 5.94e-08 | 56 |
neural keel | 5.94e-08 | 56 |
central nervous system | 1.13e-07 | 81 |
nervous system | 2.03e-07 | 89 |
regional part of nervous system | 7.65e-07 | 53 |
regional part of brain | 7.65e-07 | 53 |