FFCP PHASE1:Hg19::chr2:55843712..55843740,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57223 | |EntrezGene=57223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29267 | |HGNC=29267 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_ENST00000470801_5end | |association_with_transcript=12bp_to_ENST00000470801_5end | ||
|cluster_id=chr2:55843712..55843740,- | |||
|description=CAGE_peak_11_at_SMEK2_5end | |description=CAGE_peak_11_at_SMEK2_5end | ||
|id=chr2:55843712..55843740,- | |id=chr2:55843712..55843740,- | ||
|ontology_enrichment_celltype=CL:0000542!1.83e-10!53;CL:0000051!1.83e-10!53;CL:0000838!1.01e-09!52;CL:0000738!4.65e-08!140;CL:0000623!9.42e-07!3;CL:0000825!9.42e-07!3 | |ontology_enrichment_celltype=CL:0000542!1.83e-10!53;CL:0000051!1.83e-10!53;CL:0000838!1.01e-09!52;CL:0000738!4.65e-08!140;CL:0000623!9.42e-07!3;CL:0000825!9.42e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000623;2.92e-26;3!CL:0000624;1.03e-13;6!CL:0000784;2.12e-12;3!CL:0000791;6.22e-12;18!CL:0000789;6.22e-12;18!CL:0002419;6.22e-12;18!CL:0000542;2.57e-11;53!CL:0000895;6.32e-10;1!CL:0000084;1.51e-08;25!CL:0000236;9.67e-07;13 | |ontology_enrichment_celltype_v019=CL:0000623;2.92e-26;3!CL:0000624;1.03e-13;6!CL:0000784;2.12e-12;3!CL:0000791;6.22e-12;18!CL:0000789;6.22e-12;18!CL:0002419;6.22e-12;18!CL:0000542;2.57e-11;53!CL:0000895;6.32e-10;1!CL:0000084;1.51e-08;25!CL:0000236;9.67e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.69e-26,3;CL:0000825,2.69e-26,3;CL:0000838,1.77e-18,52;CL:0000542,4.25e-18,53;CL:0000051,4.25e-18,53;CL:0000624,1.04e-13,6;CL:0000784,2.00e-12,3;CL:0000791,6.08e-12,18;CL:0000789,6.08e-12,18;CL:0002420,6.08e-12,18;CL:0002419,6.08e-12,18;CL:0000790,6.08e-12,18;CL:0000810,8.24e-10,1;CL:0000895,8.24e-10,1;CL:0002436,8.24e-10,1;CL:0002427,8.24e-10,1;CL:0002428,8.24e-10,1;CL:0002429,8.24e-10,1;CL:0002433,8.24e-10,1;CL:0002431,8.24e-10,1;CL:0002432,8.24e-10,1;CL:0002087,8.18e-09,115;CL:0000084,1.48e-08,25;CL:0000827,1.48e-08,25;CL:0000738,1.65e-08,136;CL:0002031,2.29e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;6.22e-12;18!CL:0000051;2.57e-11;53!CL:0002427;6.32e-10;1 | |ontology_enrichment_development_v019=CL:0000790;6.22e-12;18!CL:0000051;2.57e-11;53!CL:0002427;6.32e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,0.553995408531877,0.601633342410425,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,2.27685187643779,2.93618594685469,2.29363936875137,2.64342657158052,0.560508562981536,0.263384084775077,3.73748563216283,1.57204305099666,0.205601498999509,0,0,0.473447805734733,1.94826728407911,0.445641827540694,0,0,1.08321545506006,0.128091319725675,0.390178042679635,0,0,0,1.18629250529648,1.33770414044857,1.04535523804977,0.113309342697566,1.14966148080576,2.06176467289578,1.77113784413652,0,0,0,0.301150238155546,0,0,0,0,1.20964045934839,0.534880391567015,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90792499444274,0.571994910780128,1.11437250398869,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97030760201927,1.07813787429759,1.28343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.255225424989168,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0.142283686696828,0,0,0.191505370132367,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0.500547425135725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0.269272933229316,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0.485560759068186,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0,0,0.0882561266915003,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0.275078873194468,0.83088067605837,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0.171086837884329,0,0.533937062838473,2.51526888159466,0.828478110694391,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0.450772826991655,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0.714193294391221,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,4.37505452895326,0.665320713092027,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,0.553995408531877,0.601633342410425,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,2.27685187643779,2.93618594685469,2.29363936875137,2.64342657158052,0.560508562981536,0.263384084775077,3.73748563216283,1.57204305099666,0.205601498999509,0,0,0.473447805734733,1.94826728407911,0.445641827540694,0,0,1.08321545506006,0.128091319725675,0.390178042679635,0,0,0,1.18629250529648,1.33770414044857,1.04535523804977,0.113309342697566,1.14966148080576,2.06176467289578,1.77113784413652,0,0,0,0.301150238155546,0,0,0,0,1.20964045934839,0.534880391567015,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90792499444274,0.571994910780128,1.11437250398869,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97030760201927,1.07813787429759,1.28343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.255225424989168,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0.142283686696828,0,0,0.191505370132367,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0.500547425135725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0.269272933229316,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0.485560759068186,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0,0,0.0882561266915003,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0.275078873194468,0.83088067605837,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0.171086837884329,0,0.533937062838473,2.51526888159466,0.828478110694391,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0.450772826991655,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0.714193294391221,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,4.37505452895326,0.665320713092027,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p11@SMEK2 | |short_description=p11@SMEK2 | ||
}} | }} |
Latest revision as of 17:38, 17 September 2015
Short description: | p11@SMEK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SMEK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000470801_5end |
EntrezGene: | SMEK2 |
HGNC: | 29267 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data