FFCP PHASE1:Hg19::chr17:7492979..7492991,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:7492979..7492991,-
|short_description=p5@SOX15
|description=CAGE_peak_5_at_SOX15_5end
|association_with_transcript=4bp_to_DQ890736,DQ893908_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6665 | |EntrezGene=6665 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11196 | |HGNC=11196 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_DQ890736,DQ893908_5end | |||
|cluster_id=chr17:7492979..7492991,- | |||
|description=CAGE_peak_5_at_SOX15_5end | |||
|id=chr17:7492979..7492991,- | |||
|ontology_enrichment_celltype=CL:0002076!1.77e-23!43;CL:0000066!7.58e-22!254;CL:0002159!4.09e-19!13;CL:0002368!7.68e-19!13;CL:0000223!2.12e-15!59;CL:0000622!1.20e-12!5;CL:0000076!1.36e-12!62;CL:0002202!1.43e-10!9;CL:0002632!1.43e-10!9;CL:0000154!1.81e-10!6;CL:0002077!3.07e-10!33;CL:0002251!5.01e-10!21;CL:0000150!1.90e-09!9;CL:0002621!4.70e-09!3;CL:0000068!5.22e-09!3;CL:0000069!5.22e-09!3;CL:0002328!5.22e-09!3;CL:0000307!5.22e-09!3;CL:0000377!5.22e-09!3;CL:0000220!7.57e-09!246;CL:0002321!1.09e-08!248;CL:0002166!1.22e-08!3;CL:0000362!1.70e-08!8;CL:0002623!1.40e-07!3;CL:0000240!2.42e-07!6;CL:0000311!2.42e-07!6;CL:0000079!2.42e-07!6;CL:0000237!2.42e-07!6;CL:0000036!2.42e-07!6;CL:0000357!2.42e-07!6;CL:0000114!2.42e-07!6;CL:0000317!9.02e-07!2;CL:1000448!9.02e-07!2;CL:0002308!9.02e-07!2;CL:0002140!9.02e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.38e-34;14!CL:0002202;1.60e-30;9!CL:0002632;1.60e-30;9!CL:0002368;2.92e-28;13!CL:0002621;5.56e-24;3!CL:0002328;6.01e-24;3!CL:0000307;8.21e-24;3!CL:0002076;1.28e-20;42!CL:0000317;3.71e-17;2!CL:1000448;3.71e-17;2!CL:0002308;3.71e-17;2!CL:0002140;3.71e-17;2!CL:0000575;3.23e-16;2!CL:0000362;2.10e-14;9!CL:0002077;4.02e-13;34!CL:0002231;2.38e-11;3!CL:0002166;2.64e-11;3!CL:0000622;2.21e-07;5!CL:0000076;3.05e-07;63!CL:0000312;3.15e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.41e-34,14;CL:0002202,1.68e-30,9;CL:0002632,1.68e-30,9;CL:0002076,1.54e-28,42;CL:0002368,3.04e-28,13;CL:0002621,5.35e-24,3;CL:0000068,7.31e-24,3;CL:0000069,7.31e-24,3;CL:0002328,7.31e-24,3;CL:0000307,7.31e-24,3;CL:0000377,7.31e-24,3;CL:0000223,4.95e-20,58;CL:0000317,3.57e-17,2;CL:1000448,3.57e-17,2;CL:0002308,3.57e-17,2;CL:0002140,3.57e-17,2;CL:0000066,1.21e-16,253;CL:0000575,4.08e-16,2;CL:0000362,2.29e-14,9;CL:0002077,1.26e-13,34;CL:0000076,6.80e-13,63;CL:0002166,2.04e-11,3;CL:0002231,2.78e-11,3;CL:0002321,5.05e-11,250;CL:0000622,2.17e-07,5;CL:0000312,3.46e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;8.21e-24;3!CL:0000223;6.75e-11;58 | |||
|ontology_enrichment_disease=DOID:1749!4.47e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.84e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.85e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!3.83e-16!72;UBERON:0000161!6.05e-12!35;UBERON:0000166!1.02e-11!21;UBERON:0004119!6.35e-10!169;UBERON:0000925!6.35e-10!169;UBERON:0006595!6.35e-10!169;UBERON:0000165!6.66e-10!28;UBERON:0000930!6.66e-10!28;UBERON:0000065!3.46e-09!53;UBERON:0001949!4.70e-09!3;UBERON:0004815!5.22e-09!3;UBERON:0002031!5.22e-09!3;UBERON:0003102!8.42e-09!95;UBERON:0005157!1.61e-08!51;UBERON:0007196!2.28e-08!14;UBERON:0001558!2.28e-08!14;UBERON:0000365!4.30e-08!5;UBERON:0005178!6.04e-08!34;UBERON:0002224!6.04e-08!34;UBERON:0005181!1.21e-07!35;UBERON:0005153!4.75e-07!37;UBERON:0002185!8.06e-07!4;UBERON:0001444!8.53e-07!48;UBERON:0002419!9.02e-07!2;UBERON:0007771!9.02e-07!2;UBERON:0003297!9.02e-07!2;UBERON:0001821!9.02e-07!2;UBERON:0003487!9.02e-07!2;UBERON:0001820!9.02e-07!2;UBERON:0005089!9.02e-07!2;UBERON:0005088!9.02e-07!2;UBERON:0005910!9.80e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;5.56e-24;3!UBERON:0004815;6.01e-24;3!UBERON:0002031;6.01e-24;3!UBERON:0007196;3.72e-18;15!UBERON:0001558;3.72e-18;15!UBERON:0002419;3.71e-17;2!UBERON:0007771;3.71e-17;2!UBERON:0003297;3.71e-17;2!UBERON:0001821;3.71e-17;2!UBERON:0003487;3.71e-17;2!UBERON:0001820;3.71e-17;2!UBERON:0002185;1.29e-14;5!UBERON:0004807;2.82e-12;22!UBERON:0010371;8.67e-12;31!UBERON:0003929;1.32e-10;7!UBERON:0000485;1.36e-10;7!UBERON:0003126;1.55e-10;7!UBERON:0001005;1.55e-10;7!UBERON:0000486;1.67e-10;12!UBERON:0003729;1.04e-09;13!UBERON:0003350;2.43e-09;8!UBERON:0001828;2.43e-09;8!UBERON:0005911;6.40e-09;36!UBERON:0001003;1.07e-08;15!UBERON:0007376;1.07e-08;15!UBERON:0001708;1.07e-08;4!UBERON:0008895;1.07e-08;4!UBERON:0000964;1.46e-08;4!UBERON:0010409;1.46e-08;4!UBERON:0005178;7.06e-08;34!UBERON:0002224;7.06e-08;34!UBERON:0011159;4.04e-07;5!UBERON:0005181;4.63e-07;35!UBERON:0000072;8.02e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,5.35e-24,3;UBERON:0004815,7.31e-24,3;UBERON:0002031,7.31e-24,3;UBERON:0007196,3.84e-18,15;UBERON:0001558,3.84e-18,15;UBERON:0002419,3.57e-17,2;UBERON:0007771,3.57e-17,2;UBERON:0003297,3.57e-17,2;UBERON:0001821,3.57e-17,2;UBERON:0003487,3.57e-17,2;UBERON:0001820,3.57e-17,2;UBERON:0005089,3.57e-17,2;UBERON:0005088,3.57e-17,2;UBERON:0002185,1.45e-14,5;UBERON:0003102,9.19e-13,99;UBERON:0001004,1.08e-10,74;UBERON:0003126,1.48e-10,7;UBERON:0001005,1.48e-10,7;UBERON:0003729,1.13e-09,13;UBERON:0004807,1.59e-09,28;UBERON:0003350,2.39e-09,8;UBERON:0001828,2.39e-09,8;UBERON:0001708,8.85e-09,4;UBERON:0008895,8.85e-09,4;UBERON:0001003,1.12e-08,15;UBERON:0007376,1.12e-08,15;UBERON:0007383,1.12e-08,15;UBERON:0000964,1.64e-08,4;UBERON:0010409,1.64e-08,4;UBERON:0004348,1.64e-08,4;UBERON:0005427,1.64e-08,4;UBERON:0000485,2.56e-08,9;UBERON:0005178,9.86e-08,34;UBERON:0002224,9.86e-08,34;UBERON:0000033,1.04e-07,56;UBERON:0005181,1.70e-07,35;UBERON:0005157,3.11e-07,47;UBERON:0000161,3.19e-07,36;UBERON:0011159,3.46e-07,5;UBERON:0008947,7.28e-07,38;UBERON:0003258,7.28e-07,38;UBERON:0000153,7.37e-07,62;UBERON:0007811,7.37e-07,62;UBERON:0004119,8.57e-07,160;UBERON:0000925,8.57e-07,160;UBERON:0006595,8.57e-07,160 | |||
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| ||
|short_description=p5@SOX15 | |||
}} | }} |
Latest revision as of 17:36, 17 September 2015
Short description: | p5@SOX15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SOX15_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_DQ890736, DQ893908_5end |
EntrezGene: | SOX15 |
HGNC: | 11196 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.41e-34 | 14 |
epithelial cell of tracheobronchial tree | 1.68e-30 | 9 |
epithelial cell of lower respiratory tract | 1.68e-30 | 9 |
endo-epithelial cell | 1.54e-28 | 42 |
respiratory epithelial cell | 3.04e-28 | 13 |
gingival epithelial cell | 5.35e-24 | 3 |
duct epithelial cell | 7.31e-24 | 3 |
branched duct epithelial cell | 7.31e-24 | 3 |
bronchial epithelial cell | 7.31e-24 | 3 |
tracheal epithelial cell | 7.31e-24 | 3 |
tracheoblast | 7.31e-24 | 3 |
endodermal cell | 4.95e-20 | 58 |
sebum secreting cell | 3.57e-17 | 2 |
epithelial cell of sweat gland | 3.57e-17 | 2 |
epithelial cell of skin gland | 3.57e-17 | 2 |
acinar cell of sebaceous gland | 3.57e-17 | 2 |
epithelial cell | 1.21e-16 | 253 |
corneal epithelial cell | 4.08e-16 | 2 |
epidermal cell | 2.29e-14 | 9 |
ecto-epithelial cell | 1.26e-13 | 34 |
squamous epithelial cell | 6.80e-13 | 63 |
epithelial cell of Malassez | 2.04e-11 | 3 |
epithelial cell of prostate | 2.78e-11 | 3 |
embryonic cell | 5.05e-11 | 250 |
acinar cell | 2.17e-07 | 5 |
keratinocyte | 3.46e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.85e-09 | 14 |