FFCP PHASE1:Hg19::chr1:34630742..34630755,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114784 | |EntrezGene=114784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19290 | |HGNC=19290 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUA6,Q53TY4 | |UniProt=E7EUA6,Q53TY4 | ||
|association_with_transcript=119bp_to_ENST00000373381,uc001bxm.1_5end | |association_with_transcript=119bp_to_ENST00000373381,uc001bxm.1_5end | ||
|cluster_id=chr1:34630742..34630755,- | |||
|coexpression_cluster_id=C1856 | |coexpression_cluster_id=C1856 | ||
|description=CAGE_peak_3_at_CSMD2_5end | |description=CAGE_peak_3_at_CSMD2_5end | ||
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|ontology_enrichment_celltype=CL:0000055!3.57e-12!180;CL:0002620!5.63e-08!23 | |ontology_enrichment_celltype=CL:0000055!3.57e-12!180;CL:0002620!5.63e-08!23 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.50e-32!57;UBERON:0005068!2.50e-32!57;UBERON:0006241!2.50e-32!57;UBERON:0007135!2.50e-32!57;UBERON:0005743!1.30e-31!86;UBERON:0001017!9.35e-31!82;UBERON:0000073!5.28e-29!94;UBERON:0001016!5.28e-29!94;UBERON:0002346!1.26e-26!90;UBERON:0003075!1.73e-26!86;UBERON:0007284!1.73e-26!86;UBERON:0002780!3.81e-26!41;UBERON:0001890!3.81e-26!41;UBERON:0006240!3.81e-26!41;UBERON:0002616!8.61e-26!59;UBERON:0000955!1.18e-25!69;UBERON:0006238!1.18e-25!69;UBERON:0003080!3.99e-25!42;UBERON:0002020!4.23e-25!34;UBERON:0003528!4.23e-25!34;UBERON:0001893!1.16e-24!34;UBERON:0002791!6.64e-24!33;UBERON:0001869!1.22e-23!32;UBERON:0000956!1.66e-19!25;UBERON:0000203!1.66e-19!25;UBERON:0003056!1.87e-19!61;UBERON:0002619!9.58e-18!22;UBERON:0000475!2.03e-16!365;UBERON:0001950!2.51e-16!20;UBERON:0000033!5.52e-16!123;UBERON:0000924!8.51e-16!173;UBERON:0006601!8.51e-16!173;UBERON:0004121!2.13e-15!169;UBERON:0000153!1.15e-14!129;UBERON:0007811!1.15e-14!129;UBERON:0000025!8.23e-14!194;UBERON:0007023!2.35e-13!115;UBERON:0004111!5.96e-10!241;UBERON:0000119!8.81e-09!312;UBERON:0000483!1.53e-08!309;UBERON:0003076!2.56e-08!15;UBERON:0003057!2.56e-08!15;UBERON:0002308!4.87e-07!9;UBERON:0000125!4.87e-07!9;UBERON:0000477!5.59e-07!286;UBERON:0000468!9.85e-07!659 | |ontology_enrichment_uberon=UBERON:0001049!2.50e-32!57;UBERON:0005068!2.50e-32!57;UBERON:0006241!2.50e-32!57;UBERON:0007135!2.50e-32!57;UBERON:0005743!1.30e-31!86;UBERON:0001017!9.35e-31!82;UBERON:0000073!5.28e-29!94;UBERON:0001016!5.28e-29!94;UBERON:0002346!1.26e-26!90;UBERON:0003075!1.73e-26!86;UBERON:0007284!1.73e-26!86;UBERON:0002780!3.81e-26!41;UBERON:0001890!3.81e-26!41;UBERON:0006240!3.81e-26!41;UBERON:0002616!8.61e-26!59;UBERON:0000955!1.18e-25!69;UBERON:0006238!1.18e-25!69;UBERON:0003080!3.99e-25!42;UBERON:0002020!4.23e-25!34;UBERON:0003528!4.23e-25!34;UBERON:0001893!1.16e-24!34;UBERON:0002791!6.64e-24!33;UBERON:0001869!1.22e-23!32;UBERON:0000956!1.66e-19!25;UBERON:0000203!1.66e-19!25;UBERON:0003056!1.87e-19!61;UBERON:0002619!9.58e-18!22;UBERON:0000475!2.03e-16!365;UBERON:0001950!2.51e-16!20;UBERON:0000033!5.52e-16!123;UBERON:0000924!8.51e-16!173;UBERON:0006601!8.51e-16!173;UBERON:0004121!2.13e-15!169;UBERON:0000153!1.15e-14!129;UBERON:0007811!1.15e-14!129;UBERON:0000025!8.23e-14!194;UBERON:0007023!2.35e-13!115;UBERON:0004111!5.96e-10!241;UBERON:0000119!8.81e-09!312;UBERON:0000483!1.53e-08!309;UBERON:0003076!2.56e-08!15;UBERON:0003057!2.56e-08!15;UBERON:0002308!4.87e-07!9;UBERON:0000125!4.87e-07!9;UBERON:0000477!5.59e-07!286;UBERON:0000468!9.85e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.82e-27;22!UBERON:0001950;4.76e-27;20!UBERON:0000956;1.12e-26;25!UBERON:0000203;1.12e-26;25!UBERON:0003528;1.59e-24;34!UBERON:0002020;1.59e-24;34!UBERON:0001869;1.62e-24;32!UBERON:0002791;2.26e-22;32!UBERON:0001893;5.55e-22;34!UBERON:0002780;8.07e-17;41!UBERON:0001890;8.07e-17;41!UBERON:0000073;1.01e-14;53!UBERON:0002616;1.01e-14;53!UBERON:0000955;1.21e-13;68!UBERON:0002021;2.29e-13;5!UBERON:0001017;2.40e-12;75!UBERON:0001016;2.52e-11;83!UBERON:0000200;4.72e-10;6!UBERON:0001872;1.28e-08;5!UBERON:0004733;1.76e-08;12!UBERON:0002028;1.76e-08;12!UBERON:0004732;9.49e-08;13!UBERON:0001870;1.65e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002619;1.82e-27;22!UBERON:0001950;4.76e-27;20!UBERON:0000956;1.12e-26;25!UBERON:0000203;1.12e-26;25!UBERON:0003528;1.59e-24;34!UBERON:0002020;1.59e-24;34!UBERON:0001869;1.62e-24;32!UBERON:0002791;2.26e-22;32!UBERON:0001893;5.55e-22;34!UBERON:0002780;8.07e-17;41!UBERON:0001890;8.07e-17;41!UBERON:0000073;1.01e-14;53!UBERON:0002616;1.01e-14;53!UBERON:0000955;1.21e-13;68!UBERON:0002021;2.29e-13;5!UBERON:0001017;2.40e-12;75!UBERON:0001016;2.52e-11;83!UBERON:0000200;4.72e-10;6!UBERON:0001872;1.28e-08;5!UBERON:0004733;1.76e-08;12!UBERON:0002028;1.76e-08;12!UBERON:0004732;9.49e-08;13!UBERON:0001870;1.65e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.58e-33,56;UBERON:0005068,3.58e-33,56;UBERON:0006241,3.58e-33,56;UBERON:0007135,3.58e-33,56;UBERON:0000073,1.73e-30,53;UBERON:0002616,1.73e-30,53;UBERON:0001017,1.82e-30,81;UBERON:0003528,2.17e-29,34;UBERON:0002020,2.17e-29,34;UBERON:0001869,1.89e-28,32;UBERON:0001016,4.15e-28,89;UBERON:0002619,4.21e-28,22;UBERON:0001950,1.26e-27,20;UBERON:0000956,2.64e-27,25;UBERON:0000203,2.64e-27,25;UBERON:0000955,2.71e-27,68;UBERON:0006238,2.71e-27,68;UBERON:0001893,1.81e-26,34;UBERON:0002791,9.61e-26,32;UBERON:0002346,2.74e-23,86;UBERON:0002780,3.40e-23,41;UBERON:0001890,3.40e-23,41;UBERON:0003080,3.40e-23,41;UBERON:0006240,3.40e-23,41;UBERON:0003075,4.66e-23,82;UBERON:0007284,4.66e-23,82;UBERON:0010371,2.63e-16,104;UBERON:0003056,3.62e-15,61;UBERON:0010314,5.88e-14,132;UBERON:0004121,2.19e-13,171;UBERON:0000924,2.19e-13,171;UBERON:0006601,2.19e-13,171;UBERON:0002021,2.22e-13,5;UBERON:0000025,6.63e-12,192;UBERON:0003076,4.45e-11,15;UBERON:0003057,4.45e-11,15;UBERON:0000200,2.55e-10,6;UBERON:0001872,1.68e-08,5;UBERON:0004733,1.71e-08,12;UBERON:0002028,1.71e-08,12;UBERON:0007277,1.71e-08,12;UBERON:0007023,2.80e-08,114;UBERON:0001870,3.78e-08,3;UBERON:0004111,4.89e-08,240;UBERON:0004732,9.25e-08,13;UBERON:0011216,9.23e-07,223 | |||
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| ||
|short_description=p3@CSMD2 | |short_description=p3@CSMD2 | ||
}} | }} |
Latest revision as of 17:35, 17 September 2015
Short description: | p3@CSMD2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CSMD2_5end |
Coexpression cluster: | C1856_brain_parietal_temporal_occipital_duodenum_Fibroblast_neuroectodermal |
Association with transcript: | 119bp_to_ENST00000373381, uc001bxm.1_5end |
EntrezGene: | CSMD2 |
HGNC: | 19290 |
UniProt: | E7EUA6Q53TY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data