FFCP PHASE1:Hg19::chr3:197517823..197517825,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84859 | |EntrezGene=84859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28637 | |HGNC=28637 | ||
|TSSclassifier=strong | |||
|UniProt=F8WFB5 | |UniProt=F8WFB5 | ||
|association_with_transcript=-271bp_to_ENST00000443727_5end | |association_with_transcript=-271bp_to_ENST00000443727_5end | ||
|cluster_id=chr3:197517823..197517825,+ | |||
|coexpression_cluster_id=C2098 | |||
|description=CAGE_peak_13_at_LRCH3_5end | |description=CAGE_peak_13_at_LRCH3_5end | ||
|id=chr3:197517823..197517825,+ | |id=chr3:197517823..197517825,+ | ||
|ontology_enrichment_celltype=CL:0000945!1.69e-20!24;CL:0000826!1.69e-20!24;CL:0000838!5.12e-20!52;CL:0000542!1.41e-19!53;CL:0000051!1.41e-19!53;CL:0000236!1.29e-13!14;CL:0000738!1.52e-09!140;CL:0002087!3.03e-09!119;CL:0000623!4.10e-08!3;CL:0000825!4.10e-08!3;CL:0000817!7.72e-08!3;CL:0002031!1.49e-07!124;CL:0000037!4.81e-07!172;CL:0000566!4.81e-07!172 | |ontology_enrichment_celltype=CL:0000945!1.69e-20!24;CL:0000826!1.69e-20!24;CL:0000838!5.12e-20!52;CL:0000542!1.41e-19!53;CL:0000051!1.41e-19!53;CL:0000236!1.29e-13!14;CL:0000738!1.52e-09!140;CL:0002087!3.03e-09!119;CL:0000623!4.10e-08!3;CL:0000825!4.10e-08!3;CL:0000817!7.72e-08!3;CL:0002031!1.49e-07!124;CL:0000037!4.81e-07!172;CL:0000566!4.81e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.16e-25;24!CL:0000236;2.52e-21;13!CL:0000542;6.68e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.16e-25,24;CL:0000826,1.16e-25,24;CL:0000236,7.13e-20,14;CL:0000838,1.77e-12,52;CL:0000542,2.91e-12,53;CL:0000051,2.91e-12,53 | |||
|ontology_enrichment_development_v019=CL:0000051;6.68e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.93e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.73e-08,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p13@LRCH3 | |short_description=p13@LRCH3 | ||
}} | }} |
Latest revision as of 17:31, 17 September 2015
Short description: | p13@LRCH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_LRCH3_5end |
Coexpression cluster: | C2098_lymphoma_CD19_b_CD34_Burkitt_diffuse_spleen |
Association with transcript: | -271bp_to_ENST00000443727_5end |
EntrezGene: | LRCH3 |
HGNC: | 28637 |
UniProt: | F8WFB5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.16e-25 | 24 |
pro-B cell | 1.16e-25 | 24 |
B cell | 7.13e-20 | 14 |
lymphoid lineage restricted progenitor cell | 1.77e-12 | 52 |
lymphocyte | 2.91e-12 | 53 |
common lymphoid progenitor | 2.91e-12 | 53 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.73e-08 | 10 |